Factsheet for Solyc01g007940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042202	Potato	cytosol, mitochondrion, peroxisome, plastid	17.34	96.47
CDY25781	Canola	cytosol	10.78	87.93
Solyc05g013380.2.1	Tomato	extracellular, nucleus, plastid	87.53	86.07
VIT_00s0225g00130.t01	Wine grape	cytosol	86.05	84.62
Bra016353.1-P	Field mustard	cytosol	84.99	84.1
CDY61225	Canola	peroxisome	85.2	83.78
Bra024580.1-P	Field mustard	cytosol	84.57	83.68
CDY04729	Canola	cytosol	84.57	83.68
CDY44130	Canola	cytosol	84.57	83.68
CDY41452	Canola	peroxisome	84.57	83.68
Bra016202.1-P	Field mustard	cytosol	85.2	83.61
GSMUA_Achr8P15810_001	Banana	cytosol	84.78	83.37
AT1G70580.1	Thale cress	cytosol, nucleus, peroxisome	84.57	83.16
GSMUA_Achr6P29540_001	Banana	cytosol	84.57	83.16
CDY66294	Canola	cytosol	84.36	82.95
AT1G23310.1	Thale cress	cytosol	84.14	82.74
Bra012371.1-P	Field mustard	cytosol	79.49	82.46
CDX91708	Canola	peroxisome	70.19	82.38
KRH69622	Soybean	cytosol	83.72	82.33
CDY25780	Canola	peroxisome	69.98	82.13
KRH74536	Soybean	cytosol	83.3	81.91
CDX91589	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.62	81.68
CDX88411	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.62	81.68
CDX86159	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.62	81.68
TraesCS2A01G261600.1	Wheat	peroxisome	82.45	81.42
TraesCS2B01G280600.1	Wheat	plastid	82.45	81.42
Os07t0108300-01	Rice	extracellular, nucleus, plasma membrane	82.88	80.82
KXG34265	Sorghum	cytosol	80.76	79.92
Zm00001d007937_P001	Maize	mitochondrion	80.34	79.33
HORVU2Hr1G063740.6	Barley	peroxisome, vacuole	78.86	76.75
TraesCS2D01G262400.2	Wheat	cytosol	77.8	73.75
CDY12474	Canola	peroxisome, plastid	80.97	71.32
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.63	51.74
Solyc03g123600.2.1	Tomato	cytosol	50.11	48.97
Solyc06g063090.2.1	Tomato	extracellular	50.53	44.1
Solyc03g123610.2.1	Tomato	plastid	49.05	38.28
CDX86161	Canola	cytosol	6.34	22.73
Solyc12g008740.1.1	Tomato	cytosol	19.03	20.74
Solyc02g063540.1.1	Tomato	cytosol	12.26	20.42
Solyc01g095080.2.1	Tomato	cytosol	20.93	20.41
Solyc07g026900.1.1	Tomato	cytosol	18.82	20.18
Solyc08g081550.2.1	Tomato	cytosol	19.87	19.92
Solyc08g081540.2.1	Tomato	cytosol	20.3	19.88
Solyc05g050010.2.1	Tomato	cytosol	19.66	19.54
Solyc02g091990.2.1	Tomato	cytosol	19.03	19.19
Solyc12g056180.1.1	Tomato	cytosol	18.82	18.82
Solyc03g043890.2.1	Tomato	cytosol	18.6	18.68
Solyc04g077410.2.1	Tomato	cytosol	18.18	18.26
Solyc08g008100.2.1	Tomato	nucleus	13.32	17.26
Solyc03g007070.2.1	Tomato	cytosol	18.82	16.64
Solyc08g079750.2.1	Tomato	plastid	17.76	15.33
Solyc08g008110.2.1	Tomato	cytosol, nucleus	3.17	14.85

Protein Annotations

MapMan:1.3.3.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	UniProt:K4ASZ2	PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF373	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:Solyc01g007940.2	EnsemblPlants:Solyc01g007940.2.1	UniParc:UPI0002762CEF

Description

No Description!

Coordinates

chr1:-:2123045..2128114

Molecular Weight (calculated)

52665.3 Da

IEP (calculated)

5.966

GRAVY (calculated)

-0.247

Length

473 amino acids

Sequence
(BLAST)

001: MSSKPLDYEN LNENVKKCQY AVRGELYLRA SQLQKEGKKI IFTNVGNPHA LGQKPLTFPR QVIALCQAPF LLDDPNVGQL FPADAIAKAK HYLSLNSGGL
101: GAYSDSRGIP GVRKEIADFI ERRDGYPSDP ELIFLTDGAS KGIMQILHTI IRGPNDGVLV PVPQYPLYSA TISLYGGSLV PYYLEETADW GLDINDLRQS
201: IEQARQNGIT VRAMVIINPG NPTGQCLSEQ NLRQIIQFCY EENLVLLGDE VYQQNIYQDE HPFISARKVL FDMGPPVSKE LQLVSFHTVS KGYWGECGQR
301: GGYFEMTNIP PKSVEEIYKV ASISLSPNVP AQIFLGLLAN PPKPGDISYE QFARESKGIL ESLRRRAHIM TDGFNSCKNV VCNFTEGAMY SFPQIQLPPR
401: AIDAAKKLEK APDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPSIMAS FKKFNDEFMA RYE

Best Arabidopsis Sequence Match ( AT1G70580.4 )
(BLAST)

001: MSLKALDYES LNENVKNCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVSLCQAPF LLDDPNVGMI FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI ERRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEESENW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILRFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPISKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKPGDISYD QFVRESKGIL ESLRRRARMM TDGFNSCKNV VCNFTEGAMY SFPQIKLPSK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMDS FKKFNDEFMS QYADNFGYSR M

Arabidopsis Description

GGAT2Glutamate--glyoxylate aminotransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7E9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.