Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41452 | Canola | peroxisome | 95.22 | 95.82 |
| CDY25780 | Canola | peroxisome | 80.25 | 95.78 |
| CDX91708 | Canola | peroxisome | 80.04 | 95.53 |
| Bra016353.1-P | Field mustard | cytosol | 94.8 | 95.4 |
| Bra012371.1-P | Field mustard | cytosol | 90.23 | 95.18 |
| CDY44130 | Canola | cytosol | 94.18 | 94.77 |
| CDY04729 | Canola | cytosol | 94.18 | 94.77 |
| Bra024580.1-P | Field mustard | cytosol | 94.18 | 94.77 |
| AT1G70580.1 | Thale cress | cytosol, nucleus, peroxisome | 93.14 | 93.14 |
| CDY25781 | Canola | cytosol | 11.23 | 93.1 |
| VIT_00s0225g00130.t01 | Wine grape | cytosol | 86.07 | 86.07 |
| KRH69622 | Soybean | cytosol | 85.86 | 85.86 |
| KRH74536 | Soybean | cytosol | 85.45 | 85.45 |
| PGSC0003DMT400047918 | Potato | cytosol | 84.2 | 84.2 |
| Solyc01g007940.2.1 | Tomato | cytosol | 82.74 | 84.14 |
| Solyc05g013380.2.1 | Tomato | extracellular, nucleus, plastid | 83.99 | 83.99 |
| GSMUA_Achr6P29540_001 | Banana | cytosol | 83.58 | 83.58 |
| PGSC0003DMT400042202 | Potato | cytosol, mitochondrion, peroxisome, plastid | 14.76 | 83.53 |
| Os07t0108300-01 | Rice | extracellular, nucleus, plasma membrane | 84.2 | 83.51 |
| GSMUA_Achr8P15810_001 | Banana | cytosol | 83.37 | 83.37 |
| TraesCS2A01G261600.1 | Wheat | peroxisome | 82.74 | 83.09 |
| TraesCS2B01G280600.1 | Wheat | plastid | 82.74 | 83.09 |
| KXG34265 | Sorghum | cytosol | 81.08 | 81.59 |
| CDY12474 | Canola | peroxisome, plastid | 91.06 | 81.56 |
| Zm00001d007937_P001 | Maize | mitochondrion | 80.46 | 80.79 |
| HORVU2Hr1G063740.6 | Barley | peroxisome, vacuole | 80.04 | 79.22 |
| TraesCS2D01G262400.2 | Wheat | cytosol | 77.96 | 75.15 |
| AT1G17290.1 | Thale cress | mitochondrion | 50.94 | 45.12 |
| AT1G72330.3 | Thale cress | mitochondrion | 50.1 | 43.58 |
| AT4G26200.1 | Thale cress | cytosol | 19.13 | 20.58 |
| AT5G65800.1 | Thale cress | cytosol | 18.92 | 19.36 |
| AT3G49700.1 | Thale cress | cytosol | 18.92 | 19.36 |
| AT4G37770.1 | Thale cress | cytosol | 18.71 | 19.19 |
| AT4G11280.1 | Thale cress | cytosol | 19.54 | 18.99 |
| AT4G08040.1 | Thale cress | cytosol | 18.09 | 18.91 |
| AT3G61510.1 | Thale cress | cytosol | 18.3 | 18.03 |
| AT5G51690.1 | Thale cress | golgi, mitochondrion | 18.3 | 17.78 |
| AT2G22810.1 | Thale cress | cytosol | 17.46 | 17.72 |
| AT1G01480.1 | Thale cress | cytosol | 17.67 | 17.14 |
| AT1G62960.1 | Thale cress | plastid | 18.3 | 15.8 |
Protein Annotations
| MapMan:1.3.3.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | EntrezGene:838940 | UniProt:A0A178WG36 | ProteinID:AAF87015.1 |
| ProteinID:AEE30370.1 | ProteinID:AEE30371.1 | EMBL:AF360195 | EMBL:AF479639 | EMBL:AK316871 | ArrayExpress:AT1G23310 |
| EnsemblPlantsGene:AT1G23310 | RefSeq:AT1G23310 | TAIR:AT1G23310 | RefSeq:AT1G23310-TAIR-G | EnsemblPlants:AT1G23310.1 | TAIR:AT1G23310.1 |
| EMBL:AY042902 | EMBL:AY056379 | EMBL:AY058868 | EMBL:AY150373 | InterPro:Aminotransferase_I/II | Unigene:At.24749 |
| EMBL:BT002643 | Symbol:GGT1 | GO:GO:0001666 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004021 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005777 | GO:GO:0006545 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008453 | GO:GO:0008483 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009628 | GO:GO:0009853 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0030170 |
| GO:GO:0042853 | GO:GO:0047958 | GO:GO:0048046 | InterPro:IPR015421 | InterPro:IPR015422 | RefSeq:NP_001031083.1 |
| RefSeq:NP_564192.2 | ProteinID:OAP17094.1 | PFAM:PF00155 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0006339 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11751 |
| PANTHER:PTHR11751:SF373 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | UniProt:Q9LR30 | SUPFAM:SSF53383 |
| UniParc:UPI00000AC568 | : | : | : | : | : |
Description
GGAT1Glutamate--glyoxylate aminotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR30]
Coordinates
chr1:-:8268385..8272021
Molecular Weight (calculated)
53304.3 Da
IEP (calculated)
6.881
GRAVY (calculated)
-0.183
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MALKALDYDT LNENVKKCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVALCQAPF LLDDPNVGML FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI QRRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGNGDGILV PVPQYPLYSA TISLLGGTLV PYYLDESENW GLDVANLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILKFCY NEKLVLLGDE VYQQNIYQDE RPFISSKKVL MEMGSPFSKE VQLVSFHTVS KGYWGECGQR
301: GGYFEMTNLP PRVVEEIYKV ASIALSPNVS AQIFMGLMVN PPKPGDISYD QFARESKGIL ESLRRRARLM TDGFNSCKNV VCNFTEGAMY SFPQIRLPTG
401: ALQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EDEMPEIMDS FKKFNDEFMT QYDNNFGYSK M
101: GAYSDSRGLP GVRKEVAEFI QRRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGNGDGILV PVPQYPLYSA TISLLGGTLV PYYLDESENW GLDVANLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILKFCY NEKLVLLGDE VYQQNIYQDE RPFISSKKVL MEMGSPFSKE VQLVSFHTVS KGYWGECGQR
301: GGYFEMTNLP PRVVEEIYKV ASIALSPNVS AQIFMGLMVN PPKPGDISYD QFARESKGIL ESLRRRARLM TDGFNSCKNV VCNFTEGAMY SFPQIRLPTG
401: ALQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EDEMPEIMDS FKKFNDEFMT QYDNNFGYSK M
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.