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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • plastid 2
  • vacuole 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86159 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 56.47 36.64
CDX88411 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 56.47 36.64
CDX91589 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 56.47 36.64
Bra009959.1-P Field mustard cytosol, peroxisome, plasma membrane 78.82 19.48
CDX91708 Canola peroxisome 88.24 18.61
CDY25780 Canola peroxisome 84.71 17.87
Solyc01g007940.2.1 Tomato cytosol 96.47 17.34
Bra016353.1-P Field mustard cytosol 89.41 15.9
Bra012371.1-P Field mustard cytosol 83.53 15.57
CDY44130 Canola cytosol 87.06 15.48
Bra024580.1-P Field mustard cytosol 87.06 15.48
CDY41452 Canola peroxisome 87.06 15.48
CDY04729 Canola cytosol 87.06 15.48
GSMUA_Achr8P15810_001 Banana cytosol 87.06 15.38
GSMUA_Achr6P29540_001 Banana cytosol 87.06 15.38
VIT_00s0225g00130.t01 Wine grape cytosol 85.88 15.18
CDY61225 Canola peroxisome 85.88 15.18
Bra016202.1-P Field mustard cytosol 85.88 15.15
CDY66294 Canola cytosol 84.71 14.97
AT1G70580.1 Thale cress cytosol, nucleus, peroxisome 84.71 14.97
KXG34265 Sorghum cytosol 83.53 14.85
Os07t0108300-01 Rice extracellular, nucleus, plasma membrane 84.71 14.85
Zm00001d007937_P001 Maize mitochondrion 83.53 14.82
KRH69622 Soybean cytosol 83.53 14.76
PGSC0003DMT400047918 Potato cytosol 83.53 14.76
AT1G23310.1 Thale cress cytosol 83.53 14.76
KRH74536 Soybean cytosol 83.53 14.76
TraesCS2A01G261600.1 Wheat peroxisome 81.18 14.4
TraesCS2B01G280600.1 Wheat plastid 81.18 14.4
HORVU2Hr1G063740.6 Barley peroxisome, vacuole 80.0 13.99
CDY12474 Canola peroxisome, plastid 87.06 13.78
TraesCS2D01G262400.2 Wheat cytosol 54.12 9.22
PGSC0003DMT400012549 Potato cytosol, mitochondrion 50.59 8.83
PGSC0003DMT400092723 Potato cytosol 11.76 8.55
PGSC0003DMT400084228 Potato cytosol 11.76 5.71
PGSC0003DMT400055203 Potato cytosol 17.65 3.2
PGSC0003DMT400013977 Potato cytosol 12.94 2.95
PGSC0003DMT400008605 Potato cytosol 14.12 2.84
PGSC0003DMT400008587 Potato cytosol 14.12 2.6
PGSC0003DMT400079664 Potato golgi, mitochondrion, plastid 15.29 2.58
PGSC0003DMT400012600 Potato cytosol 14.12 2.57
PGSC0003DMT400000771 Potato cytosol 12.94 2.53
PGSC0003DMT400043903 Potato cytosol 12.94 2.49
PGSC0003DMT400000553 Potato cytosol 14.12 2.47
PGSC0003DMT400032096 Potato cytosol 12.94 2.27
PGSC0003DMT400031769 Potato cytosol 12.94 2.27
PGSC0003DMT400010000 Potato plastid 14.12 2.18
PGSC0003DMT400012864 Potato cytosol 11.76 2.06
PGSC0003DMT400014932 Potato cytosol 11.76 2.06
PGSC0003DMT400055753 Potato vacuole 1.18 0.26
CDY25781 Canola cytosol 0.0 0.0
CDX86161 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400042202EnsemblPlantsGene:PGSC0003DMG400016373Gene3D:3.90.1150.10GO:GO:0003674GO:GO:0003824InterPro:IPR015422
InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1ncoils:CoilPANTHER:PTHR11751PANTHER:PTHR11751:SF373PGSC:PGSC0003DMG400016373
SUPFAM:SSF53383UniParc:UPI000296373DUniProt:M1BCN2MapMan:35.1::
Description
Alanine-2-oxoglutarate aminotransferase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400016373]
Coordinates
chr1:-:3571031..3572031
Molecular Weight (calculated)
9475.5 Da
IEP (calculated)
4.719
GRAVY (calculated)
-0.084
Length
85 amino acids
Sequence
(BLAST)
1: MYSFPQIQLP PGAIDAAKKL EKAPDVFYCL KLLEATGIST VPGSGFGQKE GVFHLRTTIL PVEEEMPSIM ASFKKFNDEF MAQYE
Best Arabidopsis Sequence Match ( AT1G23310.1 )
(BLAST)
001: MALKALDYDT LNENVKKCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVALCQAPF LLDDPNVGML FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI QRRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGNGDGILV PVPQYPLYSA TISLLGGTLV PYYLDESENW GLDVANLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILKFCY NEKLVLLGDE VYQQNIYQDE RPFISSKKVL MEMGSPFSKE VQLVSFHTVS KGYWGECGQR
301: GGYFEMTNLP PRVVEEIYKV ASIALSPNVS AQIFMGLMVN PPKPGDISYD QFARESKGIL ESLRRRARLM TDGFNSCKNV VCNFTEGAMY SFPQIRLPTG
401: ALQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EDEMPEIMDS FKKFNDEFMT QYDNNFGYSK M
Arabidopsis Description
GGAT1Glutamate--glyoxylate aminotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR30]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.