Factsheet for PGSC0003DMT400079664

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 5
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g007070.2.1	Tomato	cytosol	94.64	89.16
VIT_16s0022g02010.t01	Wine grape	cytosol	70.83	66.36
Bra022560.1-P	Field mustard	mitochondrion, plastid	63.69	64.2
CDY46931	Canola	mitochondrion, plastid	63.69	64.2
AT5G51690.1	Thale cress	golgi, mitochondrion	62.5	63.64
CDX91604	Canola	mitochondrion, plastid	62.9	63.4
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	61.71	61.83
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	62.1	61.74
KRH38710	Soybean	plastid	64.68	61.63
KRH09217	Soybean	plastid	64.48	61.55
HORVU7Hr1G053970.1	Barley	mitochondrion	9.33	60.26
PGSC0003DMT400010000	Potato	plastid	65.28	59.82
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	59.13	58.2
HORVU2Hr1G119710.1	Barley	mitochondrion	10.91	56.7
TraesCS4A01G422900.1	Wheat	golgi	59.52	54.25
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	59.33	54.17
Os06t0130400-01	Rice	plasma membrane	58.13	54.06
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	58.93	53.8
EER87775	Sorghum	plastid	58.73	53.53
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	6.15	52.54
HORVU7Hr1G012940.1	Barley	cytosol	59.52	50.08
PGSC0003DMT400000771	Potato	cytosol	40.28	46.77
PGSC0003DMT400043903	Potato	cytosol	40.28	46.03
GSMUA_Achr3P12300_001	Banana	mitochondrion	58.93	43.42
PGSC0003DMT400055203	Potato	cytosol	38.49	41.36
PGSC0003DMT400008587	Potato	cytosol	37.7	41.21
PGSC0003DMT400008605	Potato	cytosol	34.52	41.13
PGSC0003DMT400013977	Potato	cytosol	30.36	41.02
PGSC0003DMT400032096	Potato	cytosol	37.5	39.05
PGSC0003DMT400012600	Potato	cytosol	36.11	38.97
PGSC0003DMT400014932	Potato	cytosol	37.5	38.89
PGSC0003DMT400031769	Potato	cytosol	37.3	38.76
PGSC0003DMT400000553	Potato	cytosol	37.3	38.68
PGSC0003DMT400055753	Potato	vacuole	28.17	37.37
PGSC0003DMT400012864	Potato	cytosol	35.91	37.32
PGSC0003DMT400084228	Potato	cytosol	12.5	36.0
HORVU3Hr1G016440.3	Barley	cytosol	20.63	33.33
PGSC0003DMT400092723	Potato	cytosol	5.16	22.22
PGSC0003DMT400012549	Potato	cytosol, mitochondrion	19.05	19.71
PGSC0003DMT400047918	Potato	cytosol	17.86	18.71
PGSC0003DMT400042202	Potato	cytosol, mitochondrion, peroxisome, plastid	2.58	15.29

Protein Annotations

EntrezGene:102604058	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	InterPro:Aminotransferase_I/II	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M1D291
InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	EnsemblPlantsGene:PGSC0003DMG400031027	PGSC:PGSC0003DMG400031027	EnsemblPlants:PGSC0003DMT400079664	PRINTS:PR00753
ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI00029531A8	RefSeq:XP_006348054.1	SEG:seg	:

Description

Acc synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400031027]

Coordinates

chr3:-:40991022..40999406

Molecular Weight (calculated)

55615.0 Da

IEP (calculated)

6.829

GRAVY (calculated)

-0.028

Length

504 amino acids

Sequence
(BLAST)

001: MRLVVPLQGV VQGRGGLILG SLIPCALFYF LQFYSKRHRT TPSSSNPPSP STSSPNLSEL QRSSSRLNLS TRGSVGRVFL SSRASLVAAP NDSPYYIGMD
101: RFRADPYDEL DNPDGVIDLG IAENRLSLDL IEKWISSNVN GSTLGSCGDG LNINGILTYQ PFDGLAELKV AMAGFMSQVM GEKVSFDPSR MVLTSGATPA
201: IEVLCFCLAD HGNALLVPTP YYPGFDRDIR WRTGVDLIPV HCRSSDAFMV DIIALDQAFS HARKRGQKVR GILISNPSNP VGNIMSRETL CRILDFAREK
301: NIHVISDEIF AGSNYGGTEF VSIAEILDEE DPDRDRVHII YGLSKDLSVP GFRLGVLYSF NENVVAASKK LTRFCAASAP TQSLLVAMLS DAGFIKDYMR
401: TNRERLRKVF DLFVAGLKQL GIECMNSSAG LYCWVNMSGL ICPYNEKGEL ELWEKLLNVA KINVTPGSAC HCIEPGWFRC CFSTVEEKDI PVVMERIRKV
501: VERS

Best Arabidopsis Sequence Match ( AT5G51690.1 )
(BLAST)

001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS

Arabidopsis Description

ACS12Probable aminotransferase ACS12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYY0]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.