Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G119710.1 | Barley | mitochondrion | 52.54 | 31.96 |
| HORVU7Hr1G053970.1 | Barley | mitochondrion | 38.98 | 29.49 |
| HORVU3Hr1G016440.3 | Barley | cytosol | 54.24 | 10.26 |
| VIT_00s1764g00010.t01 | Wine grape | cytosol | 55.93 | 9.46 |
| TraesCS7D01G060600.2 | Wheat | golgi, mitochondrion | 69.49 | 8.01 |
| Os06t0130400-01 | Rice | plasma membrane | 69.49 | 7.56 |
| GSMUA_Achr1P18880_001 | Banana | golgi, mitochondrion | 64.41 | 7.5 |
| TraesCS7A01G066400.1 | Wheat | cytosol, golgi, plastid | 69.49 | 7.43 |
| TraesCS4A01G422900.1 | Wheat | golgi | 69.49 | 7.41 |
| CDX91604 | Canola | mitochondrion, plastid | 61.02 | 7.2 |
| EER87775 | Sorghum | plastid | 66.1 | 7.05 |
| Bra022560.1-P | Field mustard | mitochondrion, plastid | 59.32 | 7.0 |
| CDY46931 | Canola | mitochondrion, plastid | 59.32 | 7.0 |
| AT5G51690.1 | Thale cress | golgi, mitochondrion | 57.63 | 6.87 |
| HORVU7Hr1G012940.1 | Barley | cytosol | 69.49 | 6.84 |
| Zm00001d045479_P001 | Maize | cytosol, peroxisome, plastid | 62.71 | 6.7 |
| HORVU3Hr1G019430.6 | Barley | cytosol, mitochondrion | 47.46 | 6.51 |
| Solyc08g079750.2.1 | Tomato | plastid | 59.32 | 6.39 |
| PGSC0003DMT400010000 | Potato | plastid | 57.63 | 6.18 |
| PGSC0003DMT400079664 | Potato | golgi, mitochondrion, plastid | 52.54 | 6.15 |
| VIT_16s0022g02010.t01 | Wine grape | cytosol | 55.93 | 6.13 |
| KRH09217 | Soybean | plastid | 54.24 | 6.06 |
| KRH38710 | Soybean | plastid | 54.24 | 6.05 |
| GSMUA_Achr3P12300_001 | Banana | mitochondrion | 69.49 | 5.99 |
| CDY45474 | Canola | cytosol | 52.54 | 5.93 |
| Bra027008.1-P | Field mustard | cytosol | 54.24 | 5.89 |
| Solyc03g007070.2.1 | Tomato | cytosol | 52.54 | 5.79 |
| KRH27993 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 49.15 | 5.79 |
| KRH77442 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 49.15 | 5.78 |
| CDY45965 | Canola | cytosol | 52.54 | 5.71 |
| AT1G62960.1 | Thale cress | plastid | 49.15 | 5.21 |
| HORVU4Hr1G009800.5 | Barley | cytosol, plastid | 49.15 | 5.08 |
| HORVU2Hr1G094230.2 | Barley | cytosol | 38.98 | 4.75 |
| HORVU5Hr1G062990.1 | Barley | cytosol | 20.34 | 2.31 |
| HORVU2Hr1G063740.6 | Barley | peroxisome, vacuole | 18.64 | 2.26 |
| HORVU3Hr1G019410.1 | Barley | endoplasmic reticulum | 8.47 | 2.16 |
| HORVU2Hr1G030820.1 | Barley | mitochondrion | 20.34 | 2.15 |
| HORVU1Hr1G018540.17 | Barley | cytosol, golgi, plastid | 20.34 | 2.13 |
| VIT_02s0025g04980.t01 | Wine grape | cytosol, nucleus | 38.98 | 1.32 |
| HORVU5Hr1G014730.8 | Barley | cytosol, plastid, vacuole | 6.78 | 1.26 |
| HORVU7Hr1G074250.1 | Barley | cytosol, peroxisome | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G098750.1 | EnsemblPlantsGene:HORVU3Hr1G098750 | Gene3D:3.40.640.10 | GO:GO:0003674 | GO:GO:0003824 | InterPro:IPR015421 |
| InterPro:PyrdxlP-dep_Trfase_major | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF7 | UniParc:UPI000B460906 | UniProt:A0A287MGR0 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr3H:+:659907701..659908079
Molecular Weight (calculated)
6540.7 Da
IEP (calculated)
4.515
GRAVY (calculated)
-0.363
Length
59 amino acids
Sequence
(BLAST)
(BLAST)
1: SPYYPGWDRD IKWRTGIELI PVPCGSTDNF NIKEWRFVAG AESGVLGEGC QDSLLPRAA
001: MGKARGGRVT FDPERVVMSG GATGANETIM FCLADPGDVF LIPSPYYAAF DRDLRWRTGV EIIPVPCSSS DNFKLTVDAA EWAYKKAQES NKKVKGLILT
101: NPSNPLGTML DKDTLTNLVR FVTRKNIHLV VDEIYAATVF AGGDFVSVAE VVNDVDISEV NVDLIHIVYS LSKDMGLPGF RVGIVYSFND SVVSCARKMS
201: SFGLVSSQTQ LMLASMLSDD QFVDNFLMES SRRLGIRHKV FTTGIKKADI ACLTSNAGLF AWMDLRHLLR DRNSFESEIE LWHIIIDRVK LNVSPGSSFR
301: CTEPGWFRIC FANMDDDTLH VALGRIQDFV SKNKNKIVEK ASENDQVIQN KSAKKLKWTQ TNLRLSFRRL YEDGLSSPGI MSPHSPLLRA
101: NPSNPLGTML DKDTLTNLVR FVTRKNIHLV VDEIYAATVF AGGDFVSVAE VVNDVDISEV NVDLIHIVYS LSKDMGLPGF RVGIVYSFND SVVSCARKMS
201: SFGLVSSQTQ LMLASMLSDD QFVDNFLMES SRRLGIRHKV FTTGIKKADI ACLTSNAGLF AWMDLRHLLR DRNSFESEIE LWHIIIDRVK LNVSPGSSFR
301: CTEPGWFRIC FANMDDDTLH VALGRIQDFV SKNKNKIVEK ASENDQVIQN KSAKKLKWTQ TNLRLSFRRL YEDGLSSPGI MSPHSPLLRA
Arabidopsis Description
ACS21-aminocyclopropane-1-carboxylate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q06402]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.