Factsheet for Bra027008.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
endoplasmic reticulum 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45965	Canola	cytosol	98.71	98.71
AT1G62960.1	Thale cress	plastid	85.82	83.66
Solyc08g079750.2.1	Tomato	plastid	59.85	59.31
PGSC0003DMT400010000	Potato	plastid	59.67	58.91
VIT_00s1764g00010.t01	Wine grape	cytosol	37.75	58.74
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	52.67	56.86
HORVU7Hr1G053970.1	Barley	mitochondrion	8.1	56.41
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	52.12	55.82
HORVU2Hr1G119710.1	Barley	mitochondrion	9.94	55.67
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	51.93	55.08
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	5.89	54.24
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	50.09	54.18
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	49.91	54.09
TraesCS4A01G422900.1	Wheat	golgi	52.49	51.54
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	52.12	51.27
Bra022560.1-P	Field mustard	mitochondrion, plastid	46.96	51.0
Os06t0130400-01	Rice	plasma membrane	49.91	50.0
EER87775	Sorghum	plastid	50.83	49.91
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	50.28	49.46
HORVU7Hr1G012940.1	Barley	cytosol	51.93	47.08
GSMUA_Achr3P12300_001	Banana	mitochondrion	51.57	40.94
Bra026456.1-P	Field mustard	cytosol	32.78	39.73
Bra019117.1-P	Field mustard	cytosol	32.97	39.69
Bra010611.1-P	Field mustard	cytosol	34.25	39.66
Bra011784.1-P	Field mustard	cytosol	34.07	39.45
Bra012924.1-P	Field mustard	cytosol	32.97	38.09
Bra017962.1-P	Field mustard	cytosol	32.78	37.87
Bra030199.1-P	Field mustard	cytosol	32.97	37.76
Bra031846.1-P	Field mustard	cytosol	32.23	37.23
Bra024420.1-P	Field mustard	cytosol	31.86	36.81
Bra037829.1-P	Field mustard	cytosol	29.1	35.99
Bra000637.1-P	Field mustard	cytosol	30.39	35.56
Bra035236.1-P	Field mustard	cytosol	31.68	35.25
HORVU3Hr1G016440.3	Barley	cytosol	19.71	34.29
Bra007611.1-P	Field mustard	cytosol	29.65	34.04
Bra033261.1-P	Field mustard	cytosol	30.39	33.07
Bra012371.1-P	Field mustard	cytosol	16.57	19.74
Bra016202.1-P	Field mustard	cytosol	17.31	19.5
Bra024580.1-P	Field mustard	cytosol	17.13	19.46
Bra016353.1-P	Field mustard	cytosol	17.13	19.46
Bra025984.1-P	Field mustard	cytosol, mitochondrion	19.15	19.37
Bra016607.1-P	Field mustard	mitochondrion	19.15	19.19
Bra026675.1-P	Field mustard	mitochondrion	19.15	18.98
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	9.02	14.24
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	33.89	10.6

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	InterPro:Aminotransferase_I/II	EnsemblPlantsGene:Bra027008	EnsemblPlants:Bra027008.1
EnsemblPlants:Bra027008.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	UniProt:M4EDZ8	PFAM:PF00155	PRINTS:PR00753	PANTHER:PTHR43795	PANTHER:PTHR43795:SF11
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI00025424F8
SEG:seg	:	:	:	:	:

Description

AT1G62960 (E=2e-247) ACS10 | ACS10 (ACC SYNTHASE 10); 1-aminocyclopropane-1-carboxylate synthase/ L-aspartate:2-oxoglutarate aminotransferase/ aromatic-amino-acid:2-oxoglutarate aminotransferase

Coordinates

chrA09:+:7547876..7549756

Molecular Weight (calculated)

59212.4 Da

IEP (calculated)

6.593

GRAVY (calculated)

-0.226

Length

543 amino acids

Sequence
(BLAST)

001: MTRTEPNRSS KSDSENSGGG GGGTTAMRVI VPLQGVVQGR GGLFLGSVIP CAFFYFLQFY LKRNRKNEPD SGEPSPDSDP SSGSPDPTRS QSVGNLTELA
101: SLPRSLSRIL LSPRLSGGAV SISGRAGCGL KGGDSPYHVG QKRVEEDPYD ESGNPDGVIE LGSAHNTKMD WVSEDPGEAI SDGLCMSGIA SYEPSHGLIE
201: LKTAVAGFMS EATKNSVSFD PTQIVLTSGA ASAIEILSFC LADSGNAFLV PTPCSPGYDR DVKWRTGVDL IHVPCRSADN FNISMLVLDR AFYQAKKRGV
301: RIRGVIISNP WNPTGTLLSR ENLYALLDFA RERNIHIISN EVFAGSVHEE GGEFVSMAEV VDTEENVDRE RVHIIYDLSK DLSFPGLRTA AIYSFNESVL
401: SASRKLTTLS PVSSPTQHLL ISAISSPKFV QRFVKTNRER LMRVYAELVK GLKELGIECT RSSGGFFCWV DMRGFMSSYS EKGEIELWNK LLNIGKINVI
501: PGSCCHCIEP GWFRLCFSNL SERDVPVAMN RIRKVCETCK SQN

Best Arabidopsis Sequence Match ( AT1G62960.1 )
(BLAST)

001: MTRTEPNRSR SSNSDSDKNS GNVGGGRTTG MRVIVPLQGV VQGRGGLFLG SVIPCAFFYF LQFYLKRNRK NDESDNSGEQ NSSASSSSSP NSGLPDPTRS
101: QSAGHLTELT GLPRSLSRIL LSPRNSGGAV SVSGRVNCVL KGGDSSPYYV GQKRVEDDPY DELGNPDGVI QLGLAQNNKL SLDDWVLENP KEAISDGLSI
201: SGIASYEPSD GLLELKMAVA GFMTEATKNS VTFDPSQLVL TSGASSAIEI LSFCLADSGN AFLVPTPCSP GYDRDVKWRT GVDIIHVPCR SADNFNMSMV
301: VLDRAFYQAK KRGVRIRGII ISNPSNPMGS LLSRENLYAL LDFARERNIH IISNEIFAGS VHGEEGEFVS MAEIVDTEEN IDRERVHIVY DLSKDLSFRG
401: LRSAAIYSFN ESVLSASRKL TTLSPVSSPT QHLLISAISN PKNVQRFVKT NRQRLQSIYT ELVEGLKELG IECTRSNGGF YCWADMRGLI SSYSEKGEIE
501: LWNKLLNIGK INVIPGSCCH CIEPGWFRIC FSNLSERDVP VVMNRIRKVC ETCKSQN

Arabidopsis Description

ACS10Probable aminotransferase ACS10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ10]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.