Factsheet for Bra007611.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007611.1-P
Bra035236.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G61510.1	Bra007611.1-P	AT3G61510.1	14983000
AT3G61510.1	Bra035236.1-P	AT4G11280.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11360	Canola	cytosol	99.79	99.79
AT3G61510.1	Thale cress	cytosol	87.74	85.04
PGSC0003DMT400000553	Potato	cytosol	65.96	64.2
Solyc01g095080.2.1	Tomato	cytosol	65.54	63.92
Bra033261.1-P	Field mustard	cytosol	66.6	63.13
GSMUA_Achr4P24930_001	Banana	cytosol	61.73	60.71
GSMUA_Achr4P29150_001	Banana	cytosol	61.31	59.67
GSMUA_AchrUn_...	Banana	cytosol	55.39	59.14
Bra035236.1-P	Field mustard	cytosol	60.68	58.81
Solyc05g050010.2.1	Tomato	cytosol	58.77	58.4
Os04t0578000-01	Rice	cytosol	59.41	58.18
TraesCS2B01G414800.1	Wheat	cytosol	59.41	57.82
TraesCS2D01G394200.1	Wheat	cytosol	59.2	57.61
TraesCS2A01G396400.1	Wheat	cytosol	59.2	57.61
EES12700	Sorghum	cytosol	58.99	56.82
Zm00001d002592_P002	Maize	cytosol	57.72	56.29
PGSC0003DMT400084228	Potato	cytosol	20.3	54.86
Bra026456.1-P	Field mustard	cytosol	51.37	54.24
Bra019117.1-P	Field mustard	cytosol	51.16	53.66
Zm00001d026060_P003	Maize	cytosol	57.72	53.53
Bra011784.1-P	Field mustard	cytosol	52.43	52.88
Bra010611.1-P	Field mustard	cytosol	52.22	52.67
Bra037829.1-P	Field mustard	cytosol	47.15	50.8
PGSC0003DMT400055753	Potato	vacuole	40.8	50.79
Bra031846.1-P	Field mustard	cytosol	50.32	50.64
Bra024420.1-P	Field mustard	cytosol	50.11	50.43
Bra030199.1-P	Field mustard	cytosol	50.53	50.42
Bra012924.1-P	Field mustard	cytosol	49.89	50.21
Bra017962.1-P	Field mustard	cytosol	49.47	49.79
Bra000637.1-P	Field mustard	cytosol	48.63	49.57
HORVU2Hr1G094230.2	Barley	cytosol	47.15	46.07
Bra022560.1-P	Field mustard	mitochondrion, plastid	36.36	34.4
Bra027008.1-P	Field mustard	cytosol	34.04	29.65
Bra012371.1-P	Field mustard	cytosol	17.97	18.64
Bra024580.1-P	Field mustard	cytosol	18.82	18.62
Bra016353.1-P	Field mustard	cytosol	18.82	18.62
Bra016202.1-P	Field mustard	cytosol	18.82	18.46
Bra025984.1-P	Field mustard	cytosol, mitochondrion	19.66	17.32
Bra016607.1-P	Field mustard	mitochondrion	19.66	17.16
Bra026675.1-P	Field mustard	mitochondrion	19.45	16.79
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	9.73	13.37

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	EnsemblPlantsGene:Bra007611	EnsemblPlants:Bra007611.1
EnsemblPlants:Bra007611.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4CTR7	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF25	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00025429C3	SEG:seg	:

Description

AT3G61510 (E=8e-218) ACS1, AT-ACS1 | ACS1 (ACC SYNTHASE 1); 1-aminocyclopropane-1-carboxylate synthase

Coordinates

chrA09:-:30028757..30030877

Molecular Weight (calculated)

53295.1 Da

IEP (calculated)

6.874

GRAVY (calculated)

-0.207

Length

473 amino acids

Sequence
(BLAST)

001: MSPDKNLLSK LAVGDKHGED SPYFDGWKAY DTNPFHPEHN PQGVIQMGLA ENQLCSDLIK EWIKANPQAS ICTAEGIDGF SDIAVFQDYH GLKQFRQAIA
101: AFMEKARGGR VRFEEERVVM SGGATGANET LMFCLADRGD AFLVPTPYYA AFDRDLSWRT GVRIIPVECN SSNNFQVTKQ ALESAYLNAQ ETGIKIKGLI
201: LANPSNPLGT SLDRETLHTL MNFINDKQIH LVCDEIYAAT VFAEPGFISV AEMIQEMDHV NRDLIHIVYS LSKDMGLPGF RVGVVYSYND AVVTCARRMS
301: SFGLVSSQTQ SLLAAMLSDQ SFVDNFLKEV SKRVAKRHLI FTEGLKEMGI SCLTSNAGLF VLMDLRPMLK DQTFESEMAL WRIIINKVKI NISPGSSFHC
401: SEPGWFRVCF ANMDEDTLQI ALQRMKHFVL RHRENKKRKS FQENLKLSFS SMTYDEHVRT PRLMSPHSPL VRT

Best Arabidopsis Sequence Match ( AT3G61510.1 )
(BLAST)

001: MSQGACENQL LSKLALSDKH GEASPYFHGW KAYDNNPFHP THNPQGVIQM GLAENQLCSD LIKEWIKENP QASICTAEGI DSFSDIAVFQ DYHGLKQFRQ
101: AIATFMERAR GGRVRFEAER VVMSGGATGA NETIMFCLAD PGDAFLVPTP YYAAFDRDLR WRTGVRIIPV ECSSSNNFQI TKQALESAYL KAQETGIKIK
201: GLIISNPLGT SLDRETLESL VSFINDKQIH LVCDEIYAAT VFAEPGFISV AEIIQEMYYV NRDLIHIVYS LSKDMGLPGF RVGVVYSYND VVVSCARRMS
301: SFGLVSSQTQ SFLAAMLSDQ SFVDNFLVEV SKRVAKRHHM FTEGLEEMGI SCLRSNAGLF VLMDLRHMLK DQTFDSEMAL WRVIINKVKI NVSPGSSFHC
401: SEPGWFRVCF ANMDEDTLQI ALERIKDFVV GDRANKNKNC NCICNNKREN KKRKSFQKNL KLSLSSMRYE EHVRSPKLMS PHSPLLRA

Arabidopsis Description

ACS11-aminocyclopropane-1-carboxylate synthase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06429]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.