Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G394200.1 | Wheat | cytosol | 98.77 | 98.77 |
| TraesCS2A01G396400.1 | Wheat | cytosol | 98.35 | 98.35 |
| EES12700 | Sorghum | cytosol | 83.74 | 82.89 |
| Os04t0578000-01 | Rice | cytosol | 81.69 | 82.19 |
| Zm00001d002592_P002 | Maize | cytosol | 81.89 | 82.06 |
| Zm00001d026060_P003 | Maize | cytosol | 81.69 | 77.84 |
| HORVU2Hr1G094230.2 | Barley | cytosol | 71.4 | 71.69 |
| GSMUA_Achr4P29150_001 | Banana | cytosol | 66.26 | 66.26 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.44 | 64.11 |
| GSMUA_Achr4P24930_001 | Banana | cytosol | 62.55 | 63.2 |
| KRH00855 | Soybean | cytosol | 62.35 | 63.12 |
| KRH27892 | Soybean | cytosol | 61.73 | 62.5 |
| KRH41241 | Soybean | cytosol | 62.14 | 62.4 |
| VIT_02s0025g00360.t01 | Wine grape | cytosol | 61.73 | 62.37 |
| KRH59970 | Soybean | cytosol | 61.32 | 61.57 |
| Bra035236.1-P | Field mustard | cytosol | 61.73 | 61.48 |
| CDX86796 | Canola | cytosol | 61.73 | 61.48 |
| KRH40379 | Soybean | cytosol | 61.32 | 61.44 |
| KRH06585 | Soybean | cytosol | 59.88 | 61.39 |
| CDY13251 | Canola | cytosol | 61.93 | 61.3 |
| KRH48058 | Soybean | cytosol | 59.67 | 61.18 |
| AT4G11280.1 | Thale cress | cytosol | 62.14 | 61.01 |
| KRH65284 | Soybean | cytosol | 15.43 | 60.98 |
| PGSC0003DMT400000553 | Potato | cytosol | 60.49 | 60.49 |
| PGSC0003DMT400032096 | Potato | cytosol | 60.08 | 60.33 |
| PGSC0003DMT400031769 | Potato | cytosol | 59.88 | 60.0 |
| Solyc08g081540.2.1 | Tomato | cytosol | 59.47 | 59.83 |
| VIT_15s0046g02220.t01 | Wine grape | cytosol | 53.91 | 59.82 |
| Solyc01g095080.2.1 | Tomato | cytosol | 59.67 | 59.79 |
| Solyc08g081550.2.1 | Tomato | cytosol | 57.82 | 59.53 |
| Bra007611.1-P | Field mustard | cytosol | 57.82 | 59.41 |
| CDY11360 | Canola | cytosol | 57.82 | 59.41 |
| Solyc05g050010.2.1 | Tomato | cytosol | 57.61 | 58.82 |
| CDY65356 | Canola | cytosol | 57.2 | 58.77 |
| AT3G61510.1 | Thale cress | cytosol | 58.44 | 58.2 |
| PGSC0003DMT400014932 | Potato | cytosol | 57.61 | 57.61 |
| CDY15174 | Canola | cytosol | 58.64 | 57.46 |
| Bra033261.1-P | Field mustard | cytosol | 58.23 | 56.71 |
| CDX90035 | Canola | cytosol | 51.65 | 56.15 |
| AT1G01480.1 | Thale cress | cytosol | 57.2 | 56.05 |
| Solyc12g056180.1.1 | Tomato | cytosol | 54.32 | 55.81 |
| PGSC0003DMT400012864 | Potato | cytosol | 55.35 | 55.46 |
| PGSC0003DMT400084228 | Potato | cytosol | 19.96 | 55.43 |
| TraesCS3B01G125200.1 | Wheat | plastid | 50.0 | 53.41 |
| Solyc08g008100.2.1 | Tomato | nucleus | 37.04 | 49.32 |
| PGSC0003DMT400055753 | Potato | vacuole | 38.07 | 48.68 |
| TraesCS4B01G058200.1 | Wheat | cytosol | 47.33 | 47.42 |
| TraesCS1B01G102700.1 | Wheat | golgi, plastid | 18.52 | 18.67 |
| TraesCS2B01G280600.1 | Wheat | plastid | 18.11 | 18.37 |
| TraesCS5B01G214700.1 | Wheat | cytosol | 17.28 | 17.0 |
| TraesCS2B01G193600.1 | Wheat | mitochondrion | 16.87 | 14.62 |
| TraesCS5B01G066600.1 | Wheat | cytosol | 16.67 | 13.48 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | InterPro:Aminotransferase_I/II | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | InterPro:IPR015421 |
| InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 |
| PANTHER:PTHR43795:SF25 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | EnsemblPlantsGene:TraesCS2B01G414800 |
| EnsemblPlants:TraesCS2B01G414800.1 | TIGR:cd00609 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:+:592802019..592804228
Molecular Weight (calculated)
53751.2 Da
IEP (calculated)
7.436
GRAVY (calculated)
-0.201
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRSAELLS RMAAGDGHGE NSSYFDGWKA YDMNPFHPQD NRGGVIQMGL AENQLSLDLI EEWSKAHPEA SICTAEGASQ FKRIANFQDY HGLPEFRQAM
101: AQFMGQVRGW KARFDPDRVV MSGGATGAQE TLAFCLANPG EAFLVPTPYY PGFDRDCCWR SGVKLLPIEC HSSNDFRITR EAVVAAYESA RSNGVRVKGI
201: LITNPSNPLG TTADRATLAM LATFATEHRV HLICDEIYAG SVFAKPEYVS IAEVIEHDAP GVDRDLIHIA YSLSKDFGLP GFRVGIVYSY NDAVVACARK
301: MSSFGLVSSQ TQLFLAKMLG DEEFMARFLS ESARRLAARH ELFTSGLREV GIGCLGGNAG LFSWMDLRGM LREKTAEAEL ELWRVIIRKV KLNVSPGTSF
401: HCREPGWFRV CHANMDDETM GVALNRIRDF VRQHQQQKAK AQRWAARGHL HLSLQRHGAM ASQYHALSSP MAALLSPQSP LVHAAS
101: AQFMGQVRGW KARFDPDRVV MSGGATGAQE TLAFCLANPG EAFLVPTPYY PGFDRDCCWR SGVKLLPIEC HSSNDFRITR EAVVAAYESA RSNGVRVKGI
201: LITNPSNPLG TTADRATLAM LATFATEHRV HLICDEIYAG SVFAKPEYVS IAEVIEHDAP GVDRDLIHIA YSLSKDFGLP GFRVGIVYSY NDAVVACARK
301: MSSFGLVSSQ TQLFLAKMLG DEEFMARFLS ESARRLAARH ELFTSGLREV GIGCLGGNAG LFSWMDLRGM LREKTAEAEL ELWRVIIRKV KLNVSPGTSF
401: HCREPGWFRV CHANMDDETM GVALNRIRDF VRQHQQQKAK AQRWAARGHL HLSLQRHGAM ASQYHALSSP MAALLSPQSP LVHAAS
001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
Arabidopsis Description
ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.