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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G396400.1
TraesCS2A01G591300.1
TraesCS2B01G414800.1
TraesCS2B01G592500.1
TraesCS2D01G394200.1
TraesCS2D01G562900.1
TraesCS3A01G106600.1
TraesCS3B01G125200.1
TraesCS3D01G108700.1
TraesCS4A01G111500.1
TraesCS4A01G256500.1
TraesCS4B01G058200.1
TraesCS4B01G192300.1
TraesCS4D01G058200.1
TraesCS4D01G193600.2
TraesCS5A01G226200.1
TraesCS5B01G224700.3
TraesCS5D01G233400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G22810.1 TraesCS5A01G226200.1 AT1G80650.1 21798944
AT2G22810.1 TraesCS5B01G224700.3 AT1G80650.1 21798944
AT2G22810.1 TraesCS5D01G233400.1 AT1G80650.1 21798944
AT2G22810.1 TraesCS4A01G256500.1 AT2G22810.1 14983000
AT2G22810.1 TraesCS4B01G058200.1 AT2G22810.1 14983000
AT2G22810.1 TraesCS4D01G058200.1 AT2G22810.1 14983000
AT2G22810.1 TraesCS2A01G396400.1 AT4G11280.1 14983000
AT2G22810.1 TraesCS2B01G414800.1 AT4G11280.1 14983000
AT2G22810.1 TraesCS2D01G394200.1 AT4G11280.1 14983000
AT2G22810.1 TraesCS3A01G106600.1 AT4G26200.1 14983000
AT2G22810.1 TraesCS3B01G125200.1 AT4G26200.1 14983000
AT2G22810.1 TraesCS3D01G108700.1 AT4G26200.1 14983000
AT2G22810.1 TraesCS4A01G256500.1 AT4G37770.1 14983000
AT2G22810.1 TraesCS4B01G058200.1 AT4G37770.1 14983000
AT2G22810.1 TraesCS4D01G058200.1 AT4G37770.1 14983000
AT4G37770.1 TraesCS4A01G256500.1 AT2G22810.1 14983000
AT4G37770.1 TraesCS4B01G058200.1 AT2G22810.1 14983000
AT4G37770.1 TraesCS4D01G058200.1 AT2G22810.1 14983000
AT4G37770.1 TraesCS4A01G256500.1 AT4G37770.1 14983000
AT4G37770.1 TraesCS4B01G058200.1 AT4G37770.1 14983000
AT4G37770.1 TraesCS4D01G058200.1 AT4G37770.1 14983000
AT5G65800.1 TraesCS2A01G591300.1 AT4G02680.1 15118728
AT5G65800.1 TraesCS2B01G592500.1 AT4G02680.1 15118728
AT5G65800.1 TraesCS2D01G562900.1 AT4G02680.1 15118728
AT5G65800.1 TraesCS4A01G111500.1 AT5G58550.1 15118728
AT5G65800.1 TraesCS4B01G192300.1 AT5G58550.1 15118728
AT5G65800.1 TraesCS4D01G193600.2 AT5G58550.1 15118728
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G256500.1 Wheat cytosol 98.35 98.35
TraesCS4B01G058200.1 Wheat cytosol 96.7 96.7
Os03t0727600-01 Rice cytosol 85.36 85.01
Zm00001d033862_P001 Maize cytosol 82.06 82.06
HORVU4Hr1G009800.5 Barley cytosol, plastid 96.49 81.96
EER90948 Sorghum cytosol 82.89 80.89
CDY66472 Canola cytosol 58.14 69.98
GSMUA_Achr5P08880_001 Banana cytosol 67.01 69.74
Solyc02g063540.1.1 Tomato cytosol 40.62 69.37
GSMUA_Achr1P14280_001 Banana nucleus 65.15 69.15
CDX75675 Canola cytosol 63.51 68.29
GSMUA_Achr4P01340_001 Banana mitochondrion 64.95 68.18
GSMUA_Achr3P25830_001 Banana mitochondrion 63.09 68.15
GSMUA_Achr1P04420_001 Banana cytosol 64.54 67.75
GSMUA_Achr2P08600_001 Banana cytosol 64.33 67.39
PGSC0003DMT400008587 Potato cytosol 63.92 67.25
Solyc02g091990.2.1 Tomato cytosol 64.54 66.74
Bra010611.1-P Field mustard cytosol 64.33 66.52
CDY69462 Canola cytosol 64.12 66.31
CDX69326 Canola cytosol 63.92 66.1
Bra011784.1-P Field mustard cytosol 63.92 66.1
PGSC0003DMT400055203 Potato cytosol 63.71 65.88
AT4G37770.1 Thale cress cytosol 63.71 65.88
PGSC0003DMT400008605 Potato cytosol 57.11 65.48
KRH04373 Soybean cytosol 63.51 64.84
VIT_00s0840g00010.t01 Wine grape cytosol 62.68 64.82
VIT_00s1437g00010.t01 Wine grape cytosol 62.68 64.82
Solyc03g043890.2.1 Tomato cytosol 62.47 64.33
KRH77167 Soybean cytosol 62.27 64.26
KRH58165 Soybean cytosol 63.51 64.17
CDY23035 Canola cytosol 61.65 64.16
KRH28319 Soybean cytosol 62.06 63.91
AT3G49700.1 Thale cress cytosol 61.86 63.83
Bra012924.1-P Field mustard cytosol 61.86 63.83
CDY02111 Canola cytosol 61.86 63.83
CDY08163 Canola cytosol 61.86 63.83
CDY05953 Canola cytosol 61.65 63.62
Bra017962.1-P Field mustard cytosol 61.44 63.4
Bra030199.1-P Field mustard cytosol 61.86 63.29
CDY25639 Canola cytosol 61.86 63.29
AT5G65800.1 Thale cress cytosol 61.24 63.19
CDX89520 Canola cytosol 61.24 62.66
Bra031846.1-P Field mustard cytosol 60.41 62.34
PGSC0003DMT400013977 Potato cytosol 47.84 62.2
CDX81296 Canola cytosol 56.29 62.19
Bra037829.1-P Field mustard cytosol 56.29 62.19
Bra024420.1-P Field mustard cytosol 60.21 62.13
CDY18674 Canola cytosol 56.08 61.96
AT2G22810.1 Thale cress cytosol 60.41 61.81
TraesCS3D01G108700.1 Wheat cytosol, plastid 51.75 55.53
TraesCS2D01G394200.1 Wheat cytosol 47.42 47.33
TraesCS7D01G060600.2 Wheat golgi, mitochondrion 40.41 38.28
TraesCS1D01G086700.1 Wheat cytosol 15.88 19.15
TraesCS5D01G224200.1 Wheat cytosol 18.14 17.81
TraesCS5D01G070800.1 Wheat cytosol 17.53 17.49
TraesCS2D01G262400.2 Wheat cytosol 16.7 16.23
TraesCS2D01G175200.1 Wheat golgi 17.73 15.44
Protein Annotations
MapMan:11.5.1.1Gene3D:3.40.640.10Gene3D:3.90.1150.10InterPro:Aminotransferase_I/IIGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0030170InterPro:IPR015421
InterPro:IPR015422InterPro:NHTrfase_class1_PyrdxlP-BSPFAM:PF00155PRINTS:PR00753ScanProsite:PS00105PANTHER:PTHR43795
PANTHER:PTHR43795:SF10InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383EnsemblPlantsGene:TraesCS4D01G058200
EnsemblPlants:TraesCS4D01G058200.1TIGR:cd00609SEG:seg:::
Description
No Description!
Coordinates
chr4D:+:34089062..34090865
Molecular Weight (calculated)
53314.0 Da
IEP (calculated)
8.396
GRAVY (calculated)
-0.113
Length
485 amino acids
Sequence
(BLAST)
001: MVNKVADEPQ LLSKKAGCNT HGQDSSYFLG WEEYEKNPYH PTTNPGGIIQ MGLAENQLSF DLVEEWLEKN PNALGLRRGA ASVFRELALF QDYHGLPAFK
101: NALARFMSEQ RDFRVAFDPS NIVLTAGATS ANEALMFCLA DQGDAFLIPT PYYPGFDRDL KWRTGAEIVP VHCTSANGFR VTRSALDDAY RRAQKRRLRI
201: KGVLITNPSN PLGTAVPRAD LEMIVDFVAA KGIHLVSDEI YSGTAFSEPG FVSVLEVLAA RAPLAADYAL DDRVHVVYSL SKDLGLPGFR VGAIYSSNAA
301: VVSAATKMSS FGLVSSQTQY LLAALLGDKD FTRRYLAENK RRIKERHDQL VDGLKEIGIA CLESNAGLFC WVNMSHLMHA RSFEGEMTLW KKVVFDVGLN
401: ISPGSSCHCS EPGWFRVCFA NMSAKTLDVA MQRLGGFVQT SSCKAAPAAL RRAAGPARSM SCPLAMNMKW ALRLTPGFAD RKAER
Best Arabidopsis Sequence Match ( AT4G37770.1 )
(BLAST)
001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER
Arabidopsis Description
ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.