Factsheet for Os03t0727600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0192900-00
Os03t0294700-01
Os03t0727600-01
Os04t0578000-01
Os05t0196600-00
Os05t0319200-00
Os07t0178100-01
Os09t0416500-01
Os11t0585900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22810.1	Os09t0416500-01	AT1G80650.1	21798944
AT2G22810.1	Os03t0727600-01	AT2G22810.1	14983000
AT2G22810.1	Os04t0578000-01	AT4G11280.1	14983000
AT2G22810.1	Os01t0192900-00	AT4G26200.1	14983000
AT2G22810.1	Os05t0196600-00	AT4G26200.1	14983000
AT2G22810.1	Os05t0319200-00	AT4G26200.1	14983000
AT2G22810.1	Os03t0727600-01	AT4G37770.1	14983000
AT4G37770.1	Os03t0727600-01	AT2G22810.1	14983000
AT4G37770.1	Os03t0727600-01	AT4G37770.1	14983000
AT5G65800.1	Os07t0178100-01	AT4G02680.1	15118728
AT5G65800.1	Os11t0585900-01	AT4G02680.1	15118728
AT5G65800.1	Os03t0294700-01	AT5G58550.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G058200.1	Wheat	cytosol	85.63	85.98
TraesCS4A01G256500.1	Wheat	cytosol	85.22	85.57
TraesCS4D01G058200.1	Wheat	cytosol	85.01	85.36
Zm00001d033862_P001	Maize	cytosol	81.93	82.27
EER90948	Sorghum	cytosol	82.96	81.29
GSMUA_Achr1P14280_001	Banana	nucleus	68.17	72.65
HORVU4Hr1G009800.5	Barley	cytosol, plastid	84.8	72.33
GSMUA_Achr5P08880_001	Banana	cytosol	68.17	71.24
Solyc02g063540.1.1	Tomato	cytosol	40.86	70.07
GSMUA_Achr2P08600_001	Banana	cytosol	66.53	69.98
GSMUA_Achr3P25830_001	Banana	mitochondrion	64.48	69.93
CDY66472	Canola	cytosol	57.7	69.73
GSMUA_Achr1P04420_001	Banana	cytosol	65.91	69.48
GSMUA_Achr4P01340_001	Banana	mitochondrion	65.71	69.26
PGSC0003DMT400008587	Potato	cytosol	64.68	68.33
CDX75675	Canola	cytosol	63.24	68.29
PGSC0003DMT400008605	Potato	cytosol	58.11	66.9
Bra010611.1-P	Field mustard	cytosol	64.27	66.74
Solyc02g091990.2.1	Tomato	cytosol	64.27	66.74
CDY69462	Canola	cytosol	64.07	66.52
VIT_00s1437g00010.t01	Wine grape	cytosol	63.86	66.31
PGSC0003DMT400055203	Potato	cytosol	63.86	66.31
VIT_00s0840g00010.t01	Wine grape	cytosol	63.86	66.31
CDX69326	Canola	cytosol	63.66	66.1
Bra011784.1-P	Field mustard	cytosol	63.66	66.1
AT4G37770.1	Thale cress	cytosol	63.45	65.88
KRH04373	Soybean	cytosol	64.07	65.68
Solyc03g043890.2.1	Tomato	cytosol	63.45	65.61
KRH77167	Soybean	cytosol	63.04	65.32
KRH58165	Soybean	cytosol	64.27	65.21
KRH28319	Soybean	cytosol	63.04	65.18
CDY23035	Canola	cytosol	61.4	64.16
CDY08163	Canola	cytosol	61.6	63.83
CDY02111	Canola	cytosol	61.6	63.83
Bra012924.1-P	Field mustard	cytosol	61.6	63.83
Bra030199.1-P	Field mustard	cytosol	62.01	63.71
CDY05953	Canola	cytosol	61.4	63.62
AT3G49700.1	Thale cress	cytosol	61.19	63.4
Bra017962.1-P	Field mustard	cytosol	61.19	63.4
CDY25639	Canola	cytosol	61.6	63.29
AT5G65800.1	Thale cress	cytosol	60.99	63.19
CDX89520	Canola	cytosol	61.4	63.08
Bra031846.1-P	Field mustard	cytosol	60.37	62.55
PGSC0003DMT400013977	Potato	cytosol	47.84	62.47
CDX81296	Canola	cytosol	56.06	62.19
Bra024420.1-P	Field mustard	cytosol	59.96	62.13
AT2G22810.1	Thale cress	cytosol	60.37	62.03
Bra037829.1-P	Field mustard	cytosol	55.85	61.96
CDY18674	Canola	cytosol	55.65	61.73
Os05t0196600-00	Rice	cytosol	53.8	57.96
Os05t0319200-00	Rice	cytosol, mitochondrion, plastid	54.0	53.02
Os04t0578000-01	Rice	cytosol	48.87	49.28
Os01t0192900-00	Rice	endoplasmic reticulum, plasma membrane	51.75	47.28
Os06t0130400-01	Rice	plasma membrane	41.48	37.27
Os07t0617800-01	Rice	mitochondrion	13.55	20.06
Os09t0433900-01	Rice	cytosol	18.28	18.31
Os10t0390600-01	Rice	mitochondrion	18.28	18.28
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	17.86	18.01
Os07t0108300-01	Rice	extracellular, nucleus, plasma membrane	17.25	17.32
Os03t0183600-00	Rice	extracellular	16.63	16.67
Os10t0390701-00	Rice	cytosol	0.62	2.78

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EntrezGene:4333976	ProteinID:AAT77071.1	ProteinID:ABF98659.1
EMBL:AK071011	InterPro:Aminotransferase_I/II	ProteinID:BAF13056.1	ProteinID:BAS86187.1	GO:GO:0000003	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009693	GO:GO:0009835	GO:GO:0009987	GO:GO:0016829	GO:GO:0016847	GO:GO:0030170
GO:GO:0042218	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	EnsemblPlantsGene:Os03g0727600	EnsemblPlants:Os03t0727600-01
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF10	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	UniProt:Q10DK7	SUPFAM:SSF53383	UniParc:UPI00003FE6E1	RefSeq:XP_015629245.1
SEG:seg	:	:	:	:	:

Description

ACC SYNTHASE 1ACC synthase, Ethylene biosynthesis (Os03t0727600-01)

Coordinates

chr3:-:29660662..29662922

Molecular Weight (calculated)

53141.5 Da

IEP (calculated)

8.314

GRAVY (calculated)

-0.115

Length

487 amino acids

Sequence
(BLAST)

001: MVSQVVAEEK PQLLSKKAGC NSHGQDSSYF LGWQEYEKNP FDPVSNPSGI IQMGLAENQL SFDLLEEWLE KNPHALGLRR EGGGASVFRE LALFQDYHGL
101: PAFKNALARF MSEQRGYKVV FDPSNIVLTA GATSANEALM FCLADHGDAF LIPTPYYPGF DRDLKWRTGA EIVPVHCASA NGFRVTRPAL DDAYRRAQKR
201: RLRVKGVLIT NPSNPLGTAS PRADLETIVD FVAAKGIHLI SDEIYAGTAF AEPPAGFVSA LEVVAGRDGG GADVSDRVHV VYSLSKDLGL PGFRVGAIYS
301: ANAAVVSAAT KMSSFGLVSS QTQYLLAALL GDRDFTRSYV AENKRRIKER HDQLVDGLRE IGIGCLPSNA GLFCWVDMSH LMRSRSFAGE MELWKKVVFE
401: VGLNISPGSS CHCREPGWFR VCFANMSAKT LDVAMQRLRS FVDSATGGGD NAALRRAAVP VRSVSCPLAI KWALRLTPSI ADRKAER

Best Arabidopsis Sequence Match ( AT4G37770.1 )
(BLAST)

001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER

Arabidopsis Description

ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.