Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 8.33 | 7.03 |
| Os07t0617800-01 | Rice | mitochondrion | 6.48 | 2.13 |
| TraesCS1D01G086700.1 | Wheat | cytosol | 7.41 | 1.99 |
| VIT_09s0002g00340.t01 | Wine grape | mitochondrion | 9.26 | 1.9 |
| PGSC0003DMT400012549 | Potato | cytosol, mitochondrion | 8.33 | 1.85 |
| GSMUA_Achr2P07320_001 | Banana | cytosol | 8.33 | 1.85 |
| KRH06285 | Soybean | mitochondrion | 8.33 | 1.68 |
| KRH47719 | Soybean | endoplasmic reticulum | 8.33 | 1.66 |
| Solyc06g063090.2.1 | Tomato | extracellular | 8.33 | 1.66 |
| TraesCS1A01G085600.1 | Wheat | cytosol, golgi | 7.41 | 1.66 |
| TraesCS1B01G102700.1 | Wheat | golgi, plastid | 7.41 | 1.66 |
| Solyc03g123600.2.1 | Tomato | cytosol | 7.41 | 1.65 |
| Os10t0390600-01 | Rice | mitochondrion | 7.41 | 1.64 |
| Bra025984.1-P | Field mustard | cytosol, mitochondrion | 7.41 | 1.49 |
| CDY26256 | Canola | mitochondrion | 7.41 | 1.49 |
| CDY48485 | Canola | plastid | 7.41 | 1.48 |
| CDX83914 | Canola | mitochondrion | 7.41 | 1.48 |
| CDX96776 | Canola | mitochondrion | 7.41 | 1.48 |
| Bra016607.1-P | Field mustard | mitochondrion | 7.41 | 1.48 |
| AT1G17290.1 | Thale cress | mitochondrion | 7.41 | 1.47 |
| CDY21752 | Canola | mitochondrion | 7.41 | 1.46 |
| Bra026675.1-P | Field mustard | mitochondrion | 7.41 | 1.46 |
| CDX81815 | Canola | mitochondrion | 7.41 | 1.46 |
| Zm00001d030557_P001 | Maize | cytosol, extracellular | 6.48 | 1.45 |
| Os10t0390500-01 | Rice | cytosol, plasma membrane, plastid | 6.48 | 1.45 |
| AT1G72330.3 | Thale cress | mitochondrion | 7.41 | 1.45 |
| Os03t0183600-00 | Rice | extracellular | 6.48 | 1.44 |
| KXG38638 | Sorghum | cytosol | 6.48 | 1.42 |
| Os09t0433900-01 | Rice | cytosol | 5.56 | 1.23 |
| Os06t0130400-01 | Rice | plasma membrane | 3.7 | 0.74 |
| HORVU1Hr1G018540.17 | Barley | cytosol, golgi, plastid | 3.7 | 0.71 |
| Zm00001d014258_P002 | Maize | cytosol | 5.56 | 0.68 |
| Os07t0108300-01 | Rice | extracellular, nucleus, plasma membrane | 2.78 | 0.62 |
| Os03t0727600-01 | Rice | cytosol | 2.78 | 0.62 |
| Os05t0319200-00 | Rice | cytosol, mitochondrion, plastid | 2.78 | 0.6 |
| Os05t0196600-00 | Rice | cytosol | 1.85 | 0.44 |
| Os04t0578000-01 | Rice | cytosol | 1.85 | 0.41 |
| Os01t0192900-00 | Rice | endoplasmic reticulum, plasma membrane | 1.85 | 0.38 |
| Solyc03g123610.2.1 | Tomato | plastid | 0.93 | 0.17 |
| CDY50645 | Canola | cytosol | 0.0 | 0.0 |
| CDX68272 | Canola | nucleus | 0.0 | 0.0 |
| CDX68271 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os10t0390701-00 | EnsemblPlantsGene:Os10g0390701 | PANTHER:PTHR34206 | PANTHER:PTHR34206:SF3 | ProteinID:BAT10665.1 | ProteinID:EEE50895.1 |
| UniParc:UPI0001935151 | UniProt:B9G5J8 | MapMan:35.2 | : | : | : |
Description
Conserved hypothetical protein. (Os10t0390701-00)
Coordinates
chr10:+:12983013..12983507
Molecular Weight (calculated)
12212.4 Da
IEP (calculated)
4.828
GRAVY (calculated)
-0.781
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSFSGPES KKAPNSVSFT SKVNKVYEDK SMGILCYTDE SGELICEGFD EGPRLTWQDM EKINREKELK AEEDRRERMM RIGVAGIDWS SLRTAVSKPV
101: SVGEELKK
101: SVGEELKK
001: MAYSTKLYLP LKTPCFVPKT VRAKTLMLQQ SQVHVKVKKA TVSQPQPIRY STKNIVFEDP IQGIICYTDD NGEVICEGYD EGPRCPTQSP MVASYSREVE
101: ILDLLQRSYQ ELSDSNKDGQ RPIIASEQEF MMIKWSSFDF L
101: ILDLLQRSYQ ELSDSNKDGQ RPIIASEQEF MMIKWSSFDF L
Arabidopsis Description
At3g14280 [Source:UniProtKB/TrEMBL;Acc:Q9LUL9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.