CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU78269

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17290.1	OQU78269	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030557_P001	Maize	cytosol, extracellular	96.15	98.55
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	90.08	92.13
TraesCS1A01G085600.1	Wheat	cytosol, golgi	88.66	90.87
TraesCS1B01G102700.1	Wheat	golgi, plastid	88.46	90.66
TraesCS1D01G086700.1	Wheat	cytosol	72.87	89.55
GSMUA_Achr2P07320_001	Banana	cytosol	81.17	82.34
PGSC0003DMT400012549	Potato	cytosol, mitochondrion	75.1	76.18
HORVU1Hr1G018540.17	Barley	cytosol, golgi, plastid	85.43	74.96
VIT_09s0002g00340.t01	Wine grape	mitochondrion	79.35	74.52
Solyc03g123600.2.1	Tomato	cytosol	72.06	73.55
EER99708	Sorghum	mitochondrion	79.35	72.46
KRH06285	Soybean	mitochondrion	76.92	70.9
KRH47719	Soybean	endoplasmic reticulum	76.92	70.24
Bra025984.1-P	Field mustard	cytosol, mitochondrion	74.9	68.9
CDY26256	Canola	mitochondrion	74.7	68.72
Solyc06g063090.2.1	Tomato	extracellular	75.3	68.63
CDY48485	Canola	plastid	74.7	68.33
AT1G17290.1	Thale cress	mitochondrion	75.1	68.32
CDX96776	Canola	mitochondrion	74.7	68.08
Bra016607.1-P	Field mustard	mitochondrion	74.7	68.08
CDX83914	Canola	mitochondrion	74.49	68.02
CDY21752	Canola	mitochondrion	75.3	68.01
Bra026675.1-P	Field mustard	mitochondrion	75.3	67.88
CDX81815	Canola	mitochondrion	75.1	67.58
AT1G72330.3	Thale cress	mitochondrion	74.7	66.73
OQU91865	Sorghum	cytosol	40.08	65.35
CDX68271	Canola	mitochondrion	16.8	64.84
KXG35682	Sorghum	cytosol	60.12	60.0
Solyc03g123610.2.1	Tomato	plastid	72.06	58.75
KXG34265	Sorghum	cytosol	50.4	52.09
CDY50645	Canola	cytosol	22.67	51.85
Zm00001d014258_P002	Maize	cytosol	91.3	51.02
CDX83913	Canola	cytosol, nucleus, peroxisome	12.15	46.88
CDX68272	Canola	nucleus	8.3	36.94
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	18.22	19.44
EES12700	Sorghum	cytosol	18.02	18.13
EER90948	Sorghum	cytosol	17.41	17.3
EER87775	Sorghum	plastid	18.22	16.27
Os10t0390701-00	Rice	cytosol	1.42	6.48

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.3.1.1	UniProt:A0A1B6QL31	InterPro:Aminotransferase_I/II	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KXG38638	ProteinID:KXG38638	ProteinID:KXG38638.1
PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF466	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
EnsemblPlantsGene:SORBI_3001G260800	SUPFAM:SSF53383	UniParc:UPI0002207074	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:31899611..31905017

Molecular Weight (calculated)

54112.3 Da

IEP (calculated)

6.324

GRAVY (calculated)

-0.091

Length

494 amino acids

Sequence
(BLAST)

001: MAPASSVAVE NLNPKVLKCE YAVRGEIVIH AQRLQQQLQT QPGSLPFDQL IPIIFLPLQI LFCNIGNPQS LGQQPVTFFR EVLALCDHPC LLEKEETKSL
101: FSADAISRAK QILATIPGRA TGAYSHSQGI KGLRDAIAAG ITSRDGFPAN ADDIFITDGA SPGVHMMMQL LIRNEKDGIL CPIPQYPLYS ASIALHGGAL
201: VPYYLDEKTG WGLEISDLKK QLEDARSKGI DVRALVVINP GNPTGQVLAE DNQYDIVKFC KNEGLVLLAD EVYQENIYVD NKKFNSFKKI ARSMGYGEDD
301: LPLVSFQSVS KGYYGECGKR GGYMEITGFS APVREQIYKV ASVNLCSNIT GQILASLVMN PPKVGDESYA SYKAEKDAIL QSLARRAKAL EDAFNKLEGI
401: SCNKAEGAMY LFPQIHLPQK AIEAAKAAEK APDAFYALRL LESTGIVVVP GSGFGQVPGT WHIRCTILPQ EDKIPAVITR FKAFHEAFMA EYRD

Best Arabidopsis Sequence Match ( AT1G72330.1 )
(BLAST)

001: MRRFLINQAK GLVDHSRRQH HHKSPSFLSP QPRPLASSPP ALSRFFSSTS EMSASDSTSS LPVTLDSINP KVLKCEYAVR GEIVNIAQKL QEDLKTNKDA
101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI
201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR
301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL
401: ASLVMSPPKP GDDSYDSYMA ERDGILSSMA KRAKTLEDAL NSLEGVTCNR AEGAMYLFPR INLPQKAIEA AEAEKTAPDA FYCKRLLNAT GVVVVPGSGF
501: GQVPGTWHFR CTILPQEDKI PAIVNRLTEF HKSFMDEFRN

Arabidopsis Description

ALAAT2alanine aminotransferase 2 [Source:TAIR;Acc:AT1G72330]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.