CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020590_P009	Maize	cytosol	88.08	88.08
Os09t0433900-01	Rice	cytosol	75.35	76.75
TraesCS5A01G216200.1	Wheat	cytosol	74.75	74.9
TraesCS5B01G214700.1	Wheat	cytosol	74.34	74.49
TraesCS5D01G224200.1	Wheat	cytosol	74.14	74.29
HORVU5Hr1G062990.1	Barley	cytosol	74.34	70.91
KXG38638	Sorghum	cytosol	60.0	60.12
EER99708	Sorghum	mitochondrion	60.61	55.45
OQU91865	Sorghum	cytosol	32.73	53.47
KXG34265	Sorghum	cytosol	42.42	43.93
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	18.38	19.65
EER90948	Sorghum	cytosol	18.79	18.71
EES12700	Sorghum	cytosol	16.77	16.9
EER87775	Sorghum	plastid	16.77	15.01

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.3.1.1	UniProt:A0A1B6QCN3	InterPro:Aminotransferase_I/II	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170
InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KXG35682	ProteinID:KXG35682	ProteinID:KXG35682.1	ProteinID:KXG35683.1
PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF440	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
EnsemblPlantsGene:SORBI_3002G211300	SUPFAM:SSF53383	UniParc:UPI0001C80DE8	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:60387025..60396679

Molecular Weight (calculated)

55041.1 Da

IEP (calculated)

5.736

GRAVY (calculated)

-0.214

Length

495 amino acids

Sequence
(BLAST)

001: MSYNKAPSIT AETINPRVKI FSYAPCGEIL KHAERLEQEM EENPGSLPFQ EIIYCNLGNP QVLGQPPLTF FREVLSLCDN PTLLNRDETC ALFSPYSIRR
101: ARRIINKIPN KDTGGYTDSQ GIKWLRQVVA DGITGRDGFP SNADDIFLTD GASSAINLMM QILIRSHEDG ILSPLPEYPL YSASIILNGG TMVPYNLTED
201: NGWGLEIFEV KRCLEEARSA GLTVRAMVVI NPGNPTGQVL SITNQEEIVE FCRKEGLVIL ADEVYQENIY AENKKFNSFK KVARSLGYDE NDLSLVSFNS
301: VSMSYGESGR RGGYMEVTGL AADVKYQMCK VASLTICPNI AGQILISLAM DPPKLGDESF ELFDDEKEKI RLSFWKRAKT LEKAFSSMEG VSCNKLEGAL
401: YLFPRLHLPS AAIRAAESKG VSPDTFYAHR LLDATGIAVV PGSGFHQESG SIHIRCTILP DEGKIASMIP RLCAFHKAFM NEFRGSQQRM HDLRR

Best Arabidopsis Sequence Match ( AT1G17290.1 )
(BLAST)

001: MRRFVIGQAK NLIDQSRRRQ LHHHKNLSFV SLIPPFSAPS DSSSRHLSSS SSSDMSASDS SSSLPVTLDT INPKVIKCEY AVRGEIVNIA QKLQEDLKTN
101: KDAYPFDEII YCNIGNPQSL GQQPITFFRE VLALCSYTAL LDESATHGLF SSDSIERAWK ILDQIPGRAT GAYSHSQGIK GLRDAIADGI EARDGFPADP
201: NDIFMTDGAS PGVHMMMQLL ITSEKDGILC PIPQYPLYSA SIALHGGTLV PYYLDEASGW GLEISELKKQ LEDARSKGIT VRALAVINPG NPTGQVLSEE
301: NQRDVVKFCK QEGLVLLADE VYQENVYVPD KKFHSFKKVA RSMGYGEKDL ALVSFQSVSK GYYGECGKRG GYMEVTGFTS DVREQIYKMA SVNLCSNISG
401: QILASLIMSP PKPGDDSYES YIAEKDGILS SLARRAKTLE EALNKLEGVT CNRAEGAMYL FPCLHLPQKA IAAAEAEKTA PDNFYCKRLL KATGIVVVPG
501: SGFRQVPGTW HFRCTILPQE DKIPAIVDRL TAFHQSFMDE FRD

Arabidopsis Description

ALAAT1Alanine aminotransferase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4I7I0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.