CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90948
EES12700

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G61510.1	EES12700	AT3G61510.1	14983000
AT3G61510.1	EES12700	AT4G11280.1	14983000
AT4G11280.1	EER90948	AT2G22810.1	14983000
AT4G11280.1	EES12700	AT3G61510.1	14983000
AT4G11280.1	EES12700	AT4G11280.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002592_P002	Maize	cytosol	91.65	92.78
Zm00001d026060_P003	Maize	cytosol	91.24	87.84
TraesCS2B01G414800.1	Wheat	cytosol	82.89	83.74
TraesCS2A01G396400.1	Wheat	cytosol	82.69	83.54
TraesCS2D01G394200.1	Wheat	cytosol	82.48	83.33
Os04t0578000-01	Rice	cytosol	80.04	81.37
GSMUA_Achr4P29150_001	Banana	cytosol	63.95	64.61
HORVU2Hr1G094230.2	Barley	cytosol	62.53	63.43
KRH00855	Soybean	cytosol	61.91	63.33
KRH41241	Soybean	cytosol	62.32	63.22
GSMUA_AchrUn_...	Banana	cytosol	56.82	62.98
KRH27892	Soybean	cytosol	60.9	62.29
KRH59970	Soybean	cytosol	61.3	62.19
VIT_02s0025g00360.t01	Wine grape	cytosol	60.69	61.95
KRH40379	Soybean	cytosol	61.1	61.86
GSMUA_Achr4P24930_001	Banana	cytosol	60.49	61.75
KRH06585	Soybean	cytosol	58.86	60.97
KRH48058	Soybean	cytosol	58.66	60.76
VIT_15s0046g02220.t01	Wine grape	cytosol	53.97	60.5
PGSC0003DMT400000553	Potato	cytosol	59.88	60.49
CDX86796	Canola	cytosol	60.08	60.45
Bra035236.1-P	Field mustard	cytosol	60.08	60.45
AT4G11280.1	Thale cress	cytosol	60.9	60.4
PGSC0003DMT400032096	Potato	cytosol	59.47	60.33
CDY13251	Canola	cytosol	60.29	60.29
PGSC0003DMT400031769	Potato	cytosol	59.27	60.0
Solyc08g081540.2.1	Tomato	cytosol	58.86	59.83
Solyc08g081550.2.1	Tomato	cytosol	57.23	59.53
Solyc05g050010.2.1	Tomato	cytosol	57.64	59.45
Solyc01g095080.2.1	Tomato	cytosol	58.66	59.38
KRH65284	Soybean	cytosol	14.87	59.35
CDY11360	Canola	cytosol	56.82	58.99
Bra007611.1-P	Field mustard	cytosol	56.82	58.99
PGSC0003DMT400014932	Potato	cytosol	58.04	58.64
CDY65356	Canola	cytosol	56.21	58.35
AT3G61510.1	Thale cress	cytosol	57.84	58.2
CDY15174	Canola	cytosol	58.66	58.06
Bra033261.1-P	Field mustard	cytosol	58.86	57.92
AT1G01480.1	Thale cress	cytosol	58.45	57.86
CDX90035	Canola	cytosol	52.34	57.49
PGSC0003DMT400084228	Potato	cytosol	19.96	56.0
Solyc12g056180.1.1	Tomato	cytosol	53.77	55.81
PGSC0003DMT400012864	Potato	cytosol	54.38	55.05
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	50.1	53.13
Solyc08g008100.2.1	Tomato	nucleus	38.29	51.51
PGSC0003DMT400055753	Potato	vacuole	37.88	48.95
EER90948	Sorghum	cytosol	48.68	48.09
EER87775	Sorghum	plastid	36.46	32.37
KXG34265	Sorghum	cytosol	18.13	18.62
KXG38638	Sorghum	cytosol	18.13	18.02
OQU91865	Sorghum	cytosol	11.0	17.82
KXG35682	Sorghum	cytosol	16.9	16.77
EER99708	Sorghum	mitochondrion	18.33	16.64

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EntrezGene:8057616	InterPro:Aminotransferase_I/II	UniProt:C5YEG4
EnsemblPlants:EES12700	ProteinID:EES12700	ProteinID:EES12700.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422
InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF25
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3006G187900	SUPFAM:SSF53383	unigene:Sbi.2490
UniParc:UPI0001A87761	RefSeq:XP_002448372.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:54234445..54237580

Molecular Weight (calculated)

54775.3 Da

IEP (calculated)

7.054

GRAVY (calculated)

-0.263

Length

491 amino acids

Sequence
(BLAST)

001: MAGGRSAEHQ LLSRIAAGDG HGENSSYFDG WKAYDMNPFD LHRNRDGVIQ MGLAENQLSL DLIEQWSMEH PEASICTAQG ASEFRRIANF QDYHGLPEFR
101: EAMAKFMGQV RGGKVTFDPD RVVMSGGATG AQDTLAFCLA DPGDAYLVPT PYYPAFDRDC CWRSGVKLLP IECHSSNNFT LTREALVWAY DDARRQGIRV
201: RGILITNPSN PLGTTMDRAT LAMLATFATE HRVHLICDEI YAGSVFAKPD FVSIAEVIEH DVPGCNRDLI HIAYSLSKDF GLPGFRVGIV YSYNDGVVAC
301: ARKMSSFGLV SSQTQHFLAK MLSDGEFMAR FLAESARRLA ARHERFTEGL REVGIACLPG NAGLFSWMDL RGMLRDKTPD AELELWRVII HEVKLNVSPG
401: TSFHCNEPGW FRVCHANMDD DTMEVALRRI HHFVRQHQQQ QQQQSKAKAE RWAATRRLRL SLPRRGAASH LAISSPLALL SSPQSPMVHA S

Best Arabidopsis Sequence Match ( AT4G11280.1 )
(BLAST)

001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT

Arabidopsis Description

ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.