Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86796 | Canola | cytosol | 96.74 | 97.34 |
| AT4G11280.1 | Thale cress | cytosol | 91.24 | 90.51 |
| VIT_02s0025g00360.t01 | Wine grape | cytosol | 64.97 | 66.32 |
| KRH41241 | Soybean | cytosol | 64.97 | 65.91 |
| PGSC0003DMT400032096 | Potato | cytosol | 64.77 | 65.7 |
| Solyc08g081540.2.1 | Tomato | cytosol | 64.15 | 65.22 |
| KRH59970 | Soybean | cytosol | 64.15 | 65.08 |
| PGSC0003DMT400031769 | Potato | cytosol | 64.15 | 64.95 |
| Solyc08g081550.2.1 | Tomato | cytosol | 61.91 | 64.41 |
| PGSC0003DMT400014932 | Potato | cytosol | 63.54 | 64.2 |
| KRH27892 | Soybean | cytosol | 62.53 | 63.96 |
| TraesCS2A01G396400.1 | Wheat | cytosol | 61.71 | 62.35 |
| GSMUA_Achr4P24930_001 | Banana | cytosol | 60.69 | 61.95 |
| TraesCS2D01G394200.1 | Wheat | cytosol | 61.3 | 61.93 |
| TraesCS2B01G414800.1 | Wheat | cytosol | 61.3 | 61.93 |
| CDY11360 | Canola | cytosol | 59.06 | 61.31 |
| Zm00001d002592_P002 | Maize | cytosol | 59.88 | 60.62 |
| EES12700 | Sorghum | cytosol | 60.29 | 60.29 |
| GSMUA_Achr4P29150_001 | Banana | cytosol | 59.47 | 60.08 |
| CDY65356 | Canola | cytosol | 57.84 | 60.04 |
| CDX90035 | Canola | cytosol | 54.38 | 59.73 |
| CDY15174 | Canola | cytosol | 60.29 | 59.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.77 | 59.59 |
| Os04t0578000-01 | Rice | cytosol | 58.04 | 59.01 |
| Solyc12g056180.1.1 | Tomato | cytosol | 56.82 | 58.99 |
| PGSC0003DMT400012864 | Potato | cytosol | 58.04 | 58.76 |
| Solyc08g008100.2.1 | Tomato | nucleus | 42.77 | 57.53 |
| Zm00001d026060_P003 | Maize | cytosol | 59.27 | 57.06 |
| CDY72652 | Canola | cytosol | 22.81 | 55.72 |
| CDY66472 | Canola | cytosol | 45.21 | 55.09 |
| CDY42751 | Canola | cytosol | 50.31 | 54.77 |
| CDX94359 | Canola | cytosol | 49.9 | 54.69 |
| CDX75675 | Canola | cytosol | 49.9 | 54.32 |
| CDY71142 | Canola | cytosol | 49.49 | 54.24 |
| CDX89355 | Canola | cytosol | 49.49 | 54.24 |
| CDX92755 | Canola | cytosol | 45.01 | 53.12 |
| CDX69326 | Canola | cytosol | 50.51 | 52.88 |
| CDY69462 | Canola | cytosol | 50.1 | 52.45 |
| CDY34015 | Canola | cytosol | 49.49 | 52.37 |
| CDX83146 | Canola | cytosol | 49.29 | 52.16 |
| CDY25639 | Canola | cytosol | 49.9 | 51.69 |
| CDX89520 | Canola | cytosol | 49.08 | 50.84 |
| CDX81296 | Canola | cytosol | 45.42 | 50.8 |
| CDY18674 | Canola | cytosol | 45.21 | 50.57 |
| CDY08163 | Canola | cytosol | 48.27 | 50.43 |
| CDY23035 | Canola | cytosol | 47.66 | 50.21 |
| CDY02111 | Canola | cytosol | 48.07 | 50.21 |
| CDY05953 | Canola | cytosol | 48.07 | 50.21 |
| HORVU2Hr1G094230.2 | Barley | cytosol | 49.49 | 50.21 |
| CDY46931 | Canola | mitochondrion, plastid | 34.42 | 33.8 |
| CDX91604 | Canola | mitochondrion, plastid | 34.01 | 33.4 |
| CDY45474 | Canola | cytosol | 33.81 | 31.74 |
| CDY45965 | Canola | cytosol | 35.03 | 31.68 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 11.81 | 30.21 |
| CDX91708 | Canola | peroxisome | 17.72 | 21.59 |
| CDY25780 | Canola | peroxisome | 17.31 | 21.09 |
| CDY41452 | Canola | peroxisome | 19.55 | 20.08 |
| CDY61225 | Canola | peroxisome | 19.55 | 19.96 |
| CDY04729 | Canola | cytosol | 19.35 | 19.87 |
| CDY44130 | Canola | cytosol | 19.35 | 19.87 |
| CDY66294 | Canola | cytosol | 19.35 | 19.75 |
| CDX68271 | Canola | mitochondrion | 5.09 | 19.53 |
| CDY50645 | Canola | cytosol | 8.55 | 19.44 |
| CDY26256 | Canola | mitochondrion | 19.76 | 18.06 |
| CDX83914 | Canola | mitochondrion | 19.55 | 17.74 |
| CDY48485 | Canola | plastid | 19.35 | 17.59 |
| CDY21752 | Canola | mitochondrion | 19.35 | 17.37 |
| CDX96776 | Canola | mitochondrion | 19.14 | 17.34 |
| CDX81815 | Canola | mitochondrion | 19.35 | 17.3 |
| CDY12474 | Canola | peroxisome, plastid | 18.13 | 16.57 |
| CDY03822 | Canola | cytosol | 4.28 | 16.28 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 3.87 | 14.5 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 3.87 | 14.5 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 3.87 | 14.5 |
| CDY25781 | Canola | cytosol | 1.63 | 13.79 |
| CDX68272 | Canola | nucleus | 3.05 | 13.51 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 2.85 | 10.94 |
| CDX86161 | Canola | cytosol | 2.85 | 10.61 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | GO:A0A078FJ83 | UniProt:A0A078FJ83 | InterPro:Aminotransferase_I/II |
| EnsemblPlants:CDY13251 | ProteinID:CDY13251 | ProteinID:CDY13251.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00071173001 | InterPro:IPR015421 |
| InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 |
| PANTHER:PTHR43795:SF6 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EE416B |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g24050DBnaC09g24050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJ83]
Coordinates
chrLK032033:+:111117..113208
Molecular Weight (calculated)
54981.9 Da
IEP (calculated)
6.280
GRAVY (calculated)
-0.205
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MVALTAEKQD QNLLSRMAAG DGHGEKSAYF DGWKAYEENP FHPIDRPDGV IQMGLAENQL CGDLMRKWVL EHPEASICTA EGVNQFSDIA IFQDYHGLPE
101: FRQAVAKFME KTRNNKVKFD PDRIVMSGGA TGAHETVAFC LANPGDGFLV PTPYYPGFDR DLRWRTGVNL VPVTCHSSNG FKITAEALDA AYENARVSNI
201: PVKGLLITNP SNPLGTTLDR DCLKSLVKFT NDKGIHLIAD EIYAATTFGE SEFISVAEVI DEIPDCNTDL IHIVYSLSKD MGLPGLRVGI VYSYNDRVVQ
301: IARKMSSFGL VSSQTQHLIA KMLSDEDFVD EFIRKSKLRL AERHAELTTG LDGLGIGWLK AGAGLFIWMD LRNLLKTATF DSEMELWRVI VHKVKLNVSP
401: GGSCHCHEPG WFRVCFANMD YQTMETALER IRVFTCQIEE ESLILTKPMA KKKKCWQSSL RLSFKDTRRF EEGFFSPHSP VPPSPLVRAQ I
101: FRQAVAKFME KTRNNKVKFD PDRIVMSGGA TGAHETVAFC LANPGDGFLV PTPYYPGFDR DLRWRTGVNL VPVTCHSSNG FKITAEALDA AYENARVSNI
201: PVKGLLITNP SNPLGTTLDR DCLKSLVKFT NDKGIHLIAD EIYAATTFGE SEFISVAEVI DEIPDCNTDL IHIVYSLSKD MGLPGLRVGI VYSYNDRVVQ
301: IARKMSSFGL VSSQTQHLIA KMLSDEDFVD EFIRKSKLRL AERHAELTTG LDGLGIGWLK AGAGLFIWMD LRNLLKTATF DSEMELWRVI VHKVKLNVSP
401: GGSCHCHEPG WFRVCFANMD YQTMETALER IRVFTCQIEE ESLILTKPMA KKKKCWQSSL RLSFKDTRRF EEGFFSPHSP VPPSPLVRAQ I
001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
Arabidopsis Description
ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.