Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14318 | Canola | nucleus | 94.39 | 91.71 |
| Bra010441.1-P | Field mustard | cytosol | 94.15 | 91.47 |
| CDY50002 | Canola | cytosol | 37.56 | 90.06 |
| CDX94382 | Canola | cytosol | 87.32 | 85.24 |
| CDY42756 | Canola | cytosol | 85.37 | 84.75 |
| CDX89368 | Canola | cytosol | 87.56 | 84.27 |
| CDX92752 | Canola | cytosol | 84.15 | 84.15 |
| AT4G26080.1 | Thale cress | cytosol, nucleus, plastid | 84.88 | 80.18 |
| CDY38260 | Canola | cytosol | 74.88 | 72.75 |
| CDY54381 | Canola | cytosol, mitochondrion, plastid | 74.39 | 72.1 |
| CDX96761 | Canola | cytosol | 43.41 | 50.86 |
| CDX83901 | Canola | cytosol | 42.44 | 49.71 |
| CDY18067 | Canola | cytosol | 7.07 | 49.15 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 50.73 | 43.79 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 50.49 | 42.77 |
| CDY26234 | Canola | cytosol | 50.49 | 41.73 |
| CDY67227 | Canola | cytosol | 37.56 | 41.51 |
| CDY67257 | Canola | nucleus | 37.32 | 41.24 |
| CDY48313 | Canola | cytosol | 49.76 | 40.72 |
| KRH19237 | Soybean | cytosol, nucleus, peroxisome | 53.17 | 40.67 |
| KRH37441 | Soybean | cytosol | 50.98 | 40.04 |
| KRH12454 | Soybean | cytosol | 51.46 | 40.04 |
| KRH02667 | Soybean | cytosol, nucleus, peroxisome | 52.2 | 39.78 |
| CDY40181 | Canola | cytosol | 35.12 | 39.34 |
| CDY45436 | Canola | cytosol | 35.12 | 39.34 |
| PGSC0003DMT400046382 | Potato | cytosol | 50.0 | 37.68 |
| CDY08530 | Canola | nucleus | 36.1 | 37.66 |
| CDY01017 | Canola | nucleus | 36.1 | 37.66 |
| CDX80307 | Canola | nucleus, plastid | 35.85 | 37.12 |
| CDY33008 | Canola | nucleus, plastid | 35.61 | 36.96 |
| Solyc07g040990.2.1 | Tomato | cytosol | 48.05 | 36.75 |
| CDY06705 | Canola | nucleus | 34.88 | 36.67 |
| CDY38877 | Canola | cytosol | 33.9 | 34.24 |
| CDY10275 | Canola | nucleus | 35.85 | 34.19 |
| CDY32620 | Canola | cytosol | 32.2 | 33.76 |
| CDY06259 | Canola | nucleus | 35.61 | 33.49 |
| CDY36606 | Canola | nucleus | 16.59 | 27.2 |
| CDY53715 | Canola | plasma membrane, vacuole | 23.9 | 9.47 |
| CDX93912 | Canola | plasma membrane, vacuole | 23.9 | 9.46 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:A0A078ILS5 |
| UniProt:A0A078ILS5 | EnsemblPlants:CDY50003 | ProteinID:CDY50003 | ProteinID:CDY50003.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00094209001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF373 |
| SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0004EE0B10 | SEG:seg | : | : |
Description
BnaC08g12100DBnaC08g12100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILS5]
Coordinates
chrLK032874:-:18455..20174
Molecular Weight (calculated)
45099.8 Da
IEP (calculated)
6.634
GRAVY (calculated)
-0.365
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVSPAVAM PFMPFPDTQM ELAGIMLGKD SRQETSCSVS ESRRVLSSRI NSPNFNIKKQ SSPADIAAAG EEINGSDERS TEKKMISRTE SRTLFDFKSV
101: PLYGVTSICG RRPEMEDAVS AIPRFLQSPT NSLIDGRFNP QSAAHFFGVY DGHGGSQVAN YCRERMHLAL AEEIEKGKPM LYDGDTWQEK WKRALFSSFL
201: RVDSEIESVA PETVGSTSVV AVVFPTHIFV ANCGDSRAVL CRGKTALPLS TDHKPDREDE AARIEAAGGK VIRWNGGRVF GVLAMSRSIG DRYLKPSIIP
301: DPEVTAVKRV KEDDCLILAS DGVWDVMTDE EACEMARKRI LLWHKKNMVA GDASLLTEER KGGGEGEDPA ARSAAEYLSK LALQRGSKDN ITVVVVDLKP
401: HRKLKIKALS
101: PLYGVTSICG RRPEMEDAVS AIPRFLQSPT NSLIDGRFNP QSAAHFFGVY DGHGGSQVAN YCRERMHLAL AEEIEKGKPM LYDGDTWQEK WKRALFSSFL
201: RVDSEIESVA PETVGSTSVV AVVFPTHIFV ANCGDSRAVL CRGKTALPLS TDHKPDREDE AARIEAAGGK VIRWNGGRVF GVLAMSRSIG DRYLKPSIIP
301: DPEVTAVKRV KEDDCLILAS DGVWDVMTDE EACEMARKRI LLWHKKNMVA GDASLLTEER KGGGEGEDPA ARSAAEYLSK LALQRGSKDN ITVVVVDLKP
401: HRKLKIKALS
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.