Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031574.1-P | Field mustard | nucleus | 99.31 | 99.31 |
| CDY06705 | Canola | nucleus | 76.61 | 85.64 |
| CDY10275 | Canola | nucleus | 80.5 | 81.63 |
| AT1G07430.1 | Thale cress | nucleus | 81.42 | 80.32 |
| CDY36606 | Canola | nucleus | 45.87 | 80.0 |
| CDY18067 | Canola | cytosol | 9.4 | 69.49 |
| CDY40181 | Canola | cytosol | 53.67 | 63.93 |
| CDY45436 | Canola | cytosol | 53.21 | 63.39 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.45 | 60.78 |
| KXG35986 | Sorghum | cytosol, peroxisome, plastid | 26.38 | 56.65 |
| VIT_06s0004g05460.t01 | Wine grape | nucleus | 49.31 | 54.71 |
| Solyc06g076400.2.1 | Tomato | nucleus | 51.38 | 54.63 |
| CDY67257 | Canola | nucleus | 46.33 | 54.45 |
| CDY67227 | Canola | cytosol | 46.33 | 54.45 |
| CDY33008 | Canola | nucleus, plastid | 49.31 | 54.43 |
| CDX80307 | Canola | nucleus, plastid | 49.31 | 54.29 |
| GSMUA_Achr5P29000_001 | Banana | cytosol | 46.33 | 52.88 |
| TraesCS5A01G183600.1 | Wheat | peroxisome | 41.97 | 52.44 |
| TraesCS5B01G182000.1 | Wheat | peroxisome | 41.74 | 52.15 |
| GSMUA_Achr11P... | Banana | cytosol | 47.02 | 51.9 |
| Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 41.51 | 51.71 |
| TraesCS5D01G188600.1 | Wheat | peroxisome | 41.28 | 51.58 |
| GSMUA_Achr6P15180_001 | Banana | cytosol | 43.58 | 51.35 |
| EER96576 | Sorghum | cytosol | 41.97 | 51.26 |
| CDY08530 | Canola | nucleus | 45.64 | 50.64 |
| Os09t0325700-01 | Rice | cytosol | 41.51 | 50.56 |
| CDY01017 | Canola | nucleus | 45.18 | 50.13 |
| Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 40.37 | 49.16 |
| HORVU4Hr1G060370.1 | Barley | nucleus | 44.95 | 49.0 |
| TraesCS3D01G355900.1 | Wheat | plastid | 44.27 | 48.61 |
| Os03t0268600-01 | Rice | nucleus | 44.95 | 48.51 |
| HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 43.58 | 48.35 |
| TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 43.35 | 48.34 |
| TraesCS4A01G094300.1 | Wheat | nucleus | 44.95 | 47.92 |
| TraesCS4B01G210100.1 | Wheat | nucleus | 44.5 | 47.78 |
| TraesCS4D01G210900.1 | Wheat | nucleus | 44.72 | 47.56 |
| Zm00001d028574_P001 | Maize | nucleus | 42.89 | 47.22 |
| Zm00001d042886_P001 | Maize | nucleus | 43.58 | 46.57 |
| EES01744 | Sorghum | plastid | 43.81 | 46.36 |
| EER92493 | Sorghum | nucleus | 42.43 | 46.13 |
| Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 43.58 | 46.0 |
| Os01t0846300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 43.58 | 45.89 |
| TraesCS3B01G394600.3 | Wheat | plastid | 43.35 | 44.16 |
| CDY50002 | Canola | cytosol | 16.05 | 40.94 |
| KXG22152 | Sorghum | nucleus | 43.35 | 40.73 |
| CDY38877 | Canola | cytosol | 35.09 | 37.68 |
| CDY32620 | Canola | cytosol | 33.03 | 36.83 |
| CDX83901 | Canola | cytosol | 29.13 | 36.29 |
| CDX96761 | Canola | cytosol | 29.13 | 36.29 |
| CDY50003 | Canola | nucleus | 33.49 | 35.61 |
| CDX92752 | Canola | cytosol | 33.26 | 35.37 |
| CDX94382 | Canola | cytosol | 33.95 | 35.24 |
| CDY42756 | Canola | cytosol | 33.26 | 35.11 |
| CDX89368 | Canola | cytosol | 33.95 | 34.74 |
| CDY14318 | Canola | nucleus | 33.26 | 34.36 |
| CDY38260 | Canola | cytosol | 33.03 | 34.12 |
| CDY54381 | Canola | cytosol, mitochondrion, plastid | 33.03 | 34.04 |
| CDY26234 | Canola | cytosol | 32.11 | 28.23 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 30.73 | 28.21 |
| CDY48313 | Canola | cytosol | 32.34 | 28.14 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 31.19 | 28.1 |
| PGSC0003DMT400049695 | Potato | extracellular | 2.98 | 11.82 |
| CDY53715 | Canola | plasma membrane, vacuole | 18.58 | 7.83 |
| CDX93912 | Canola | plasma membrane, vacuole | 18.58 | 7.82 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:A0A078F082 | EnsemblPlants:CDY06259 |
| ProteinID:CDY06259 | ProteinID:CDY06259.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00122177001 | InterPro:IPR001932 |
| InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF518 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI0004EF322B | SEG:seg | : | : | : | : |
Description
BnaA09g49440D
Coordinates
chrLK031968:-:499532..501269
Molecular Weight (calculated)
49038.7 Da
IEP (calculated)
6.337
GRAVY (calculated)
-0.733
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDICYEDDA LACETRPSWK SRRRRIGVQR CRMSPSEMNK TVAAEDTEGI YKRNKQDEYD FMNCASPPRS SPEGCSEGDE SLLLDGEIRR DENNISGENS
101: SVIGVVPSKK TVRETDARPR YGVASVCGRR RDMEDMVAIH PSFVRKQTEF SRARWHYFGV YDGHGCSHVA SRCKERLHEL VQEEALSDKN EEWKKMMERS
201: FTRMDKEAVR WEETVMSANC KCELQTPNCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKPVPLSTD HKPDRPDELD RIQEAGGRVI YWDGPRVLGV
301: LATSRAIGDN YLKPYVSSEP EVTVTDRTEE DEFMILASDG LWDVVTNEAA CATVQMYLNK KGGRGEGRRR EATEGEERKD EEVVGSRKNG KRGEITDRAC
401: TEASVLLTKL ALAKHSSDNV SVVVIDLSRR RKRHVA
101: SVIGVVPSKK TVRETDARPR YGVASVCGRR RDMEDMVAIH PSFVRKQTEF SRARWHYFGV YDGHGCSHVA SRCKERLHEL VQEEALSDKN EEWKKMMERS
201: FTRMDKEAVR WEETVMSANC KCELQTPNCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKPVPLSTD HKPDRPDELD RIQEAGGRVI YWDGPRVLGV
301: LATSRAIGDN YLKPYVSSEP EVTVTDRTEE DEFMILASDG LWDVVTNEAA CATVQMYLNK KGGRGEGRRR EATEGEERKD EEVVGSRKNG KRGEITDRAC
401: TEASVLLTKL ALAKHSSDNV SVVVIDLSRR RKRHVA
001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA
Arabidopsis Description
AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.