Factsheet for Zm00001d020100_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
plastid 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d010209_P001
Zm00001d010210_P001
Zm00001d011473_P003
Zm00001d012475_P001
Zm00001d016294_P001
Zm00001d018799_P001
Zm00001d028793_P001
Zm00001d030045_P001
Zm00001d038252_P001
Zm00001d038436_P001
Zm00001d038949_P001
Zm00001d042829_P001
Zm00001d043014_P001
Zm00001d044056_P003
Zm00001d047037_P001
Zm00001d047705_P001
Zm00001d053687_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07430.1	Zm00001d018799_P001	AT1G30270.1	17898163
AT1G07430.1	Zm00001d011473_P003	AT2G26650.1	17898163
AT1G07430.1	Zm00001d044056_P003	AT2G26650.1	17898163
AT1G07430.1	Zm00001d038949_P001	AT3G06610.1	21798944
AT1G07430.1	Zm00001d042829_P001	AT3G06610.1	21798944
AT3G11410.1	Zm00001d016294_P001	AT1G73000.1	19407142
AT3G11410.1	Zm00001d016294_P001	AT2G26040.1	19407142
AT3G11410.1	Zm00001d053687_P001	AT2G33610.1	19033529
AT3G11410.1	Zm00001d012475_P001	AT2G38310.1	19407142
AT3G11410.1	Zm00001d028793_P001	AT2G38310.1	19407142
AT3G11410.1	Zm00001d038436_P001	AT2G38310.1	19407142
AT3G11410.1	Zm00001d043014_P001	AT2G38310.1	19407142
AT3G11410.1	Zm00001d047705_P001	AT2G38310.1	19407142
AT3G11410.1	Zm00001d030045_P001	AT4G17870.1	19407142
AT3G11410.1	Zm00001d047037_P001	AT4G17870.1	19407142
AT3G11410.1	Zm00001d010209_P001	AT4G22200.1	11181729
AT3G11410.1	Zm00001d010210_P001	AT4G22200.1	11181729
AT3G11410.1	Zm00001d038252_P001	AT4G22200.1	11181729
AT3G11410.1	Zm00001d010209_P001	AT4G22200.1	12034902
AT3G11410.1	Zm00001d010210_P001	AT4G22200.1	12034902
AT3G11410.1	Zm00001d038252_P001	AT4G22200.1	12034902
AT3G11410.1	Zm00001d030045_P001	AT5G46790.1	19407142
AT3G11410.1	Zm00001d047037_P001	AT5G46790.1	19407142
AT5G59220.1	Zm00001d012475_P001	AT2G38310.1	19407142
AT5G59220.1	Zm00001d028793_P001	AT2G38310.1	19407142
AT5G59220.1	Zm00001d038436_P001	AT2G38310.1	19407142
AT5G59220.1	Zm00001d043014_P001	AT2G38310.1	19407142
AT5G59220.1	Zm00001d047705_P001	AT2G38310.1	19407142
AT5G59220.1	Zm00001d030045_P001	AT4G17870.1	19407142
AT5G59220.1	Zm00001d047037_P001	AT4G17870.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	84.36	86.29
EER96576	Sorghum	cytosol	84.08	84.31
KXG35986	Sorghum	cytosol, peroxisome, plastid	45.81	80.79
TraesCS5A01G183600.1	Wheat	peroxisome	72.91	74.79
TraesCS5D01G188600.1	Wheat	peroxisome	72.63	74.5
TraesCS5B01G182000.1	Wheat	peroxisome	72.63	74.5
Os09t0325700-01	Rice	cytosol	73.46	73.46
GSMUA_AchrUn_...	Banana	cytosol	49.44	62.54
CDY18067	Canola	cytosol	8.94	54.24
GSMUA_Achr6P15180_001	Banana	cytosol	55.59	53.78
AT2G29380.1	Thale cress	nucleus	51.4	50.83
Zm00001d028574_P001	Maize	nucleus	55.31	50.0
Bra018398.1-P	Field mustard	cytosol	50.56	49.45
CDY67227	Canola	cytosol	51.12	49.33
CDY40181	Canola	cytosol	50.28	49.18
CDY67257	Canola	nucleus	50.84	49.06
CDY45436	Canola	cytosol	50.0	48.91
Zm00001d042886_P001	Maize	nucleus	55.59	48.77
VIT_06s0004g05460.t01	Wine grape	nucleus	53.35	48.6
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	55.59	48.18
Bra002038.1-P	Field mustard	nucleus	51.12	48.16
CDY01017	Canola	nucleus	51.4	46.82
AT3G11410.1	Thale cress	cytosol	51.96	46.62
CDY08530	Canola	nucleus	51.12	46.56
VIT_13s0019g02200.t01	Wine grape	plastid	51.96	46.5
CDY06705	Canola	nucleus	50.56	46.41
KRH15068	Soybean	cytosol	51.4	46.0
Bra034845.1-P	Field mustard	nucleus	51.12	45.86
KRH31027	Soybean	cytosol	51.12	45.64
KRG97855	Soybean	cytosol	50.84	45.5
KRH73525	Soybean	cytosol, mitochondrion, peroxisome, plastid	13.41	45.28
Solyc05g052980.2.1	Tomato	nucleus	51.4	44.99
PGSC0003DMT400069947	Potato	cytosol	52.23	44.74
PGSC0003DMT400077989	Potato	cytosol	51.12	44.63
AT5G59220.1	Thale cress	nucleus	51.4	44.55
Zm00001d009626_P001	Maize	nucleus	46.65	44.53
KRH73067	Soybean	cytosol	50.56	44.47
Bra002594.1-P	Field mustard	plastid	51.12	44.42
Solyc06g076400.2.1	Tomato	nucleus	49.72	43.41
Solyc03g096670.2.1	Tomato	nucleus	49.16	43.35
CDY33008	Canola	nucleus, plastid	47.49	43.04
CDX80307	Canola	nucleus, plastid	47.21	42.68
CDY10275	Canola	nucleus	50.84	42.33
Bra015579.1-P	Field mustard	nucleus	50.28	42.25
PGSC0003DMT400043146	Potato	nucleus	48.32	42.2
AT1G07430.1	Thale cress	nucleus	51.12	41.4
Zm00001d011495_P001	Maize	cytosol	45.53	41.37
Zm00001d044015_P001	Maize	cytosol	46.65	40.73
Bra031574.1-P	Field mustard	nucleus	49.44	40.6
CDY06259	Canola	nucleus	49.16	40.37
Bra030455.1-P	Field mustard	cytosol	16.48	37.11
Zm00001d038846_P001	Maize	cytosol, nucleus	37.99	36.76
Zm00001d025055_P001	Maize	cytosol	46.09	35.56
Zm00001d011132_P001	Maize	cytosol, nucleus	14.53	34.9
Zm00001d009747_P001	Maize	cytosol	40.22	34.04
CDY36606	Canola	nucleus	23.18	33.2
Zm00001d039163_P002	Maize	cytosol	39.66	33.1
Zm00001d011131_P001	Maize	cytosol	25.98	32.98
Zm00001d011202_P002	Maize	cytosol, peroxisome, plastid	37.99	31.05
Zm00001d044301_P001	Maize	cytosol, nucleus	39.11	28.93
Zm00001d004357_P001	Maize	nucleus	43.85	28.86
Zm00001d007529_P001	Maize	nucleus	20.39	14.31
PGSC0003DMT400049695	Potato	extracellular	2.79	9.09
Zm00001d007528_P001	Maize	extracellular, vacuole	5.87	8.27
Zm00001d007533_P001	Maize	extracellular	0.28	0.94
Zm00001d007558_P001	Maize	cytosol	0.28	0.88
Zm00001d007554_P001	Maize	cytosol	0.56	0.83
Zm00001d007530_P001	Maize	cytosol	0.28	0.57
Zm00001d007532_P001	Maize	cytosol	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100279578	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	UniProt:A0A096T5F5
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EMBL:KJ855119	ProteinID:ONM54279.1
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF518	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000220AA2E
EnsemblPlantsGene:Zm00001d020100	EnsemblPlants:Zm00001d020100_P001	EnsemblPlants:Zm00001d020100_T001	SEG:seg	:	:

Description

protein phosphatase homolog6 protein phosphatase homolog6

Coordinates

chr7:+:92004425..92005501

Molecular Weight (calculated)

37601.2 Da

IEP (calculated)

6.822

GRAVY (calculated)

-0.142

Length

358 amino acids

Sequence
(BLAST)

001: MSMAQVCCDS AVAATAAPVV GAEAEARARA RAERRSRAGE SGAWKHAVAA GTADATRKRS LGAGELLVAR KHGAASVAGR RREMEDAVSV RDAFCAEGTA
101: DGGRRDFYGV FDGHGCSHVA EACRDRMHEL VAEELAATAA DSSVSAAAAW TVAMERSFAR MDAEVTSAGG RAAAARSSTC RCDAHRCDHV GSTAVVAVVE
201: EHSVIVANCG DSRAVLCRGD GAPPLPLSSD HKPDRPDELE RIESAGGRVI FWEGARVLGV LAMSRAVGDG YLKPYVSSVP EVTVTDRSDG DECLILGSDG
301: LWDVVSNEAA CEVARACLRR GRAKWCAEAA ALLTKLALAR RSSDNVSVVV IDLRRRNH

Best Arabidopsis Sequence Match ( AT2G29380.1 )
(BLAST)

001: MAEICYEVVT DACPSSVYES TPAHSRRRPR FQTVMHEDWE KNCKRSKQEA LATRYSSIPR SSREDFSDQN VDVSSPRYGV SSVCGRRREM EDAVAIHPSF
101: SSPKNSEFPQ HYFGVYDGHG CSHVAARCRE RLHKLVQEEL SSDMEDEEEW KTTMERSFTR MDKEVVSWGD SVVTANCKCD LQTPACDSVG STAVVSVITP
201: DKIVVANCGD SRAVLCRNGK PVPLSTDHKP DRPDELDRIE GAGGRVIYWD CPRVLGVLAM SRAIGDNYLK PYVSCEPEVT ITDRRDDDCL ILASDGLWDV
301: VSNETACSVA RMCLRGGGRR QDNEDPAISD KACTEASVLL TKLALARNSS DNVSVVVIDL RR

Arabidopsis Description

HAI3HAI3 [Source:UniProtKB/TrEMBL;Acc:A0A178VWK9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.