Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007558_P001 | Maize | cytosol | 70.75 | 66.37 |
| Zm00001d007530_P001 | Maize | cytosol | 91.51 | 55.75 |
| Zm00001d007554_P001 | Maize | cytosol | 90.57 | 39.67 |
| Zm00001d007532_P001 | Maize | cytosol | 5.66 | 6.82 |
| Zm00001d011132_P001 | Maize | cytosol, nucleus | 2.83 | 2.01 |
| Zm00001d007529_P001 | Maize | nucleus | 3.77 | 0.78 |
| Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 1.89 | 0.46 |
| Zm00001d044301_P001 | Maize | cytosol, nucleus | 1.89 | 0.41 |
| Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 0.94 | 0.29 |
| Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 0.94 | 0.28 |
| Zm00001d038846_P001 | Maize | cytosol, nucleus | 0.94 | 0.27 |
| Zm00001d009626_P001 | Maize | nucleus | 0.94 | 0.27 |
| Zm00001d028574_P001 | Maize | nucleus | 0.94 | 0.25 |
| Zm00001d009747_P001 | Maize | cytosol | 0.94 | 0.24 |
| Zm00001d039163_P002 | Maize | cytosol | 0.94 | 0.23 |
| Zm00001d011131_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d007528_P001 | Maize | extracellular, vacuole | 0.0 | 0.0 |
| Zm00001d011495_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 0.0 | 0.0 |
| Zm00001d025055_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d042886_P001 | Maize | nucleus | 0.0 | 0.0 |
| Zm00001d044015_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d004357_P001 | Maize | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d007533_P001 | EnsemblPlants:Zm00001d007533_T001 | EnsemblPlantsGene:Zm00001d007533 | Gene3D:1.10.510.10 | InterPro:Kinase-like_dom_sf | ProteinID:ONM27066.1 |
| SUPFAM:SSF56112 | UniParc:UPI000843669D | UniProt:A0A1D6F750 | MapMan:35.1 | : | : |
Description
disease resistance protein (TIR-NBS class)
Coordinates
chr2:+:234173727..234174847
Molecular Weight (calculated)
12070.6 Da
IEP (calculated)
6.671
GRAVY (calculated)
-0.159
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLGSEVFQI GLQLRSYMEL CILVPGISSQ HHGSGSPEQG QFGLASWKCS EESFAHQVKI RDPLKIGLVF PNLWALRLAR QLLVWHPEDR LSVDEALNHP
101: YFQEPM
101: YFQEPM
001: QVERGPTVYL SGLREKHFGE LFLNAYNVSE SSSATQASSS QAASSELGLS EEGLKHIARY IEYFESRYND IWLVFHHEGV SLSKLMYTVE EAEISSEKAE
101: EASHGQILRP SKWWTWLKTT ESGKEEMRRI IWQLLLGLKA CHDRNITHRD IKPENMVICL EDIKSGRCLK GVPNGDQNFK TNMRIIDFGS ALDEYTIKHL
201: YGSTGPSRAE QTHDYAPPEA ILNSSWHHGP TSLTLKYDMW SVGVVMLEMI LGSPNVFEIS SVTRALLDQH IRGWSENFKE LAYKLRSLME MCILIPGSSL
301: KHGGASSKQG GISLASWKCS EEFFAEQIKS RDPLKIGFPN VWALRLVRGL LQWYPEDRVT VDEALQHPYF QPPPSS
101: EASHGQILRP SKWWTWLKTT ESGKEEMRRI IWQLLLGLKA CHDRNITHRD IKPENMVICL EDIKSGRCLK GVPNGDQNFK TNMRIIDFGS ALDEYTIKHL
201: YGSTGPSRAE QTHDYAPPEA ILNSSWHHGP TSLTLKYDMW SVGVVMLEMI LGSPNVFEIS SVTRALLDQH IRGWSENFKE LAYKLRSLME MCILIPGSSL
301: KHGGASSKQG GISLASWKCS EEFFAEQIKS RDPLKIGFPN VWALRLVRGL LQWYPEDRVT VDEALQHPYF QPPPSS
Arabidopsis Description
Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G63340]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.