Factsheet for Zm00001d009626_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 29344831

gfp PMID: 29344831 doi

YG Wang, FL Fu, HQ Yu, T Hu, YY Zhang, Y Tao, JK Zhu, Y Zhao, WC Li

Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78453	Sorghum	nucleus	84.8	80.51
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	41.87	77.72
Os05t0572700-02	Rice	cytosol	69.87	68.77
TraesCS1A01G411200.1	Wheat	nucleus	66.93	65.71
TraesCS1D01G419000.1	Wheat	nucleus	65.33	64.99
HORVU1Hr1G090360.2	Barley	cytosol, mitochondrion, nucleus	67.47	64.05
TraesCS1B01G441400.1	Wheat	cytosol	65.33	63.8
PGSC0003DMT400094534	Potato	cytosol	30.4	57.0
Zm00001d011495_P001	Maize	cytosol	59.47	56.6
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	50.93	56.51
Zm00001d044015_P001	Maize	cytosol	61.6	56.34
KRH77641	Soybean	plastid	44.0	50.93
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	47.2	50.57
KRH27848	Soybean	nucleus	42.93	47.92
Zm00001d020100_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	44.53	46.65
KRG94219	Soybean	plastid	46.13	45.89
KRH16556	Soybean	plastid	47.2	45.85
VIT_16s0050g02680.t01	Wine grape	nucleus	35.73	45.42
Solyc03g007230.2.1	Tomato	cytosol	46.13	43.58
PGSC0003DMT400023517	Potato	nucleus	45.87	43.11
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	45.07	43.0
Zm00001d028574_P001	Maize	nucleus	44.27	41.92
PGSC0003DMT400050448	Potato	cytosol	43.2	40.7
Solyc08g082260.1.1	Tomato	nucleus	42.13	40.2
Zm00001d042886_P001	Maize	nucleus	43.73	40.2
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	35.47	40.18
Zm00001d038846_P001	Maize	cytosol, nucleus	39.47	40.0
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	43.73	39.71
Solyc06g051940.2.1	Tomato	cytosol	45.07	38.24
Zm00001d011132_P001	Maize	cytosol, nucleus	14.67	36.91
Zm00001d009747_P001	Maize	cytosol	41.33	36.64
Zm00001d039163_P002	Maize	cytosol	40.53	35.43
Zm00001d011131_P001	Maize	cytosol	26.4	35.11
Zm00001d011202_P002	Maize	cytosol, peroxisome, plastid	40.8	34.93
Zm00001d025055_P001	Maize	cytosol	41.07	33.19
Zm00001d044301_P001	Maize	cytosol, nucleus	41.33	32.02
Zm00001d004357_P001	Maize	nucleus	38.4	26.47
Zm00001d007529_P001	Maize	nucleus	21.07	15.49
Zm00001d007528_P001	Maize	extracellular, vacuole	7.2	10.63
Zm00001d007533_P001	Maize	extracellular	0.27	0.94
Zm00001d007558_P001	Maize	cytosol	0.27	0.88
Zm00001d007530_P001	Maize	cytosol	0.27	0.57
Zm00001d007554_P001	Maize	cytosol	0.27	0.41
Zm00001d007532_P001	Maize	cytosol	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100381666	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	ProteinID:AQK92314.1
EMBL:BT061924	UniProt:C0HHW8	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006470	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009719	GO:GO:0009788	GO:GO:0009791	GO:GO:0009987	GO:GO:0010030	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	EMBL:KJ855120	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00019486B7	EnsemblPlantsGene:Zm00001d009626	EnsemblPlants:Zm00001d009626_P001	EnsemblPlants:Zm00001d009626_T001
SEG:seg	:	:	:	:	:

Description

protein phosphatase homolog9 protein phosphatase homolog9

Coordinates

chr8:-:73804434..73806809

Molecular Weight (calculated)

39969.0 Da

IEP (calculated)

7.438

GRAVY (calculated)

-0.298

Length

375 amino acids

Sequence
(BLAST)

001: MRENGAARDE GPALCKAAAA DGGGDVGAAS ARRRRRLGRA TEGPAPTKRI RSGSQRSPYD SSLETATDGC CWPARLSHGA VSVIGRRREM EDAFAVALSF
101: LASEAVGGEQ EQELDFFAVY DGHGGARVAE ACRERMHVVL AEEVGLRRRR SGSDDLRWEE AMAASFARVD GEVTGGLSSP HHDDAGSSLP YRTVGSTAVV
201: AVVGRRRIVV GNCGDSRAVL SRGGVAVPLS SDHKPDRPDE MQRVEAAGGR VVNWNGYRVL GVLATSRSIG DYYLKPYVSA EPEVTVVERT ERDEFLILAS
301: DGLWDVVSNE AACKIARSCL SGRAASRFPG SVAGRTAADA AALLAELALS RGSRDNISVV VVELRRLQTD QMTRV

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.