Factsheet for PGSC0003DMT400023517

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g007230.2.1	Tomato	cytosol	90.23	90.68
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	30.08	59.41
PGSC0003DMT400094534	Potato	cytosol	28.32	56.5
GSMUA_Achr2P19990_001	Banana	cytosol	31.83	53.81
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	42.36	50.0
Os05t0572700-02	Rice	cytosol	46.62	48.82
PGSC0003DMT400050448	Potato	cytosol	47.37	47.49
KRG94219	Soybean	plastid	44.11	46.68
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	46.37	46.25
TraesCS3A01G237800.1	Wheat	plastid	45.61	46.19
Zm00001d009626_P001	Maize	nucleus	43.11	45.87
HORVU3Hr1G059170.2	Barley	cytosol, nucleus	45.61	45.61
KRH16556	Soybean	plastid	44.11	45.6
Os01t0656200-01	Rice	cytosol, nucleus, plastid	45.61	45.16
TraesCS1B01G441400.1	Wheat	cytosol	43.11	44.79
TraesCS1A01G411200.1	Wheat	nucleus	42.86	44.76
OQU78453	Sorghum	nucleus	44.11	44.56
GSMUA_Achr10P...	Banana	plastid	40.85	44.05
TraesCS1D01G419000.1	Wheat	nucleus	41.6	44.03
HORVU1Hr1G090360.2	Barley	cytosol, mitochondrion, nucleus	43.36	43.8
VIT_16s0050g02680.t01	Wine grape	nucleus	32.33	43.73
TraesCS3B01G266200.1	Wheat	nucleus, peroxisome, plastid	44.86	43.24
Zm00001d011495_P001	Maize	cytosol	42.61	43.15
PGSC0003DMT400019552	Potato	cytosol, peroxisome, plastid	11.53	42.99
GSMUA_Achr2P19980_001	Banana	vacuole	5.76	42.59
Zm00001d044015_P001	Maize	cytosol	43.61	42.44
PGSC0003DMT400090149	Potato	cytosol	33.33	40.06
PGSC0003DMT400077989	Potato	cytosol	38.1	37.07
PGSC0003DMT400069947	Potato	cytosol	38.6	36.84
KXG33023	Sorghum	nucleus	43.36	36.5
PGSC0003DMT400091100	Potato	cytosol, nucleus, plastid	31.08	36.26
PGSC0003DMT400043146	Potato	nucleus	37.09	36.1
PGSC0003DMT400021210	Potato	cytosol, nucleus, peroxisome	8.02	35.56
PGSC0003DMT400006608	Potato	plastid	36.84	26.97
PGSC0003DMT400046382	Potato	cytosol	35.34	25.92
PGSC0003DMT400075333	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	34.34	25.56
PGSC0003DMT400078131	Potato	golgi, vacuole	18.8	23.96
PGSC0003DMT400057134	Potato	mitochondrion	14.29	19.52
PGSC0003DMT400049695	Potato	extracellular	1.5	5.45

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102582408	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
InterPro:IPR001932	InterPro:IPR036457	UniProt:M1AII6	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400009112	PGSC:PGSC0003DMG400009112
EnsemblPlants:PGSC0003DMT400023517	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0001FBE259
RefSeq:XP_006350568.1	SEG:seg	:	:	:	:

Description

Protein phosphatase 2C 8 [Source:PGSC_GENE;Acc:PGSC0003DMG400009112]

Coordinates

chr3:+:48709108..48712687

Molecular Weight (calculated)

44233.0 Da

IEP (calculated)

5.260

GRAVY (calculated)

-0.476

Length

399 amino acids

Sequence
(BLAST)

001: MIDNVKGLPP VAEKGCRLTA LVDSGGLAEV DLSEKEPNFT RRRRLNERRL KSSPDLPENF NVFAADYRHY KKKKPENSTV TDTDDQVQLA TSSEVKKVRE
101: SLVTCCSHGS ISLIGRRREM EDAVAIYPSF FSEGSSRKYD YFGVYDGHGG SRVAHACRDF LHRLVIQQVS EGEDYDGKSI NWENVMMESF RKMDEKVNKE
201: GAEMATIGST AVVAVVGEEE FVVANCGDSR AVLSRAGVAV PLSIDHKPDR PDELDRIENS GGKVINWNGQ RVLGVLATSR SIGDMYLKPY VIPDPEVLVS
301: QRSDEDEFLL LASDGLWDVI PNDVACDVTR RCLNGQTFRR CDQQTKSHKR DDQSSEGVKE SLAARAASFL AELAIARGSR DNISVIVVDL NRSVCSSTD

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.