Factsheet for Solyc03g007230.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023517	Potato	nucleus	90.68	90.23
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	30.73	60.4
GSMUA_Achr2P19990_001	Banana	cytosol	32.49	54.66
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	42.57	50.0
Os05t0572700-02	Rice	cytosol	47.61	49.61
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	47.86	47.5
TraesCS3A01G237800.1	Wheat	plastid	47.1	47.46
Solyc06g051940.2.1	Tomato	cytosol	52.39	47.06
HORVU3Hr1G059170.2	Barley	cytosol, nucleus	46.85	46.62
KRG94219	Soybean	plastid	44.08	46.42
Zm00001d009626_P001	Maize	nucleus	43.58	46.13
KRH16556	Soybean	plastid	44.58	45.85
Os01t0656200-01	Rice	cytosol, nucleus, plastid	46.35	45.66
OQU78453	Sorghum	nucleus	44.58	44.81
TraesCS1A01G411200.1	Wheat	nucleus	43.07	44.76
TraesCS1B01G441400.1	Wheat	cytosol	43.07	44.53
TraesCS3B01G266200.1	Wheat	nucleus, peroxisome, plastid	46.35	44.44
GSMUA_Achr10P...	Banana	plastid	41.31	44.32
TraesCS1D01G419000.1	Wheat	nucleus	42.07	44.3
VIT_16s0050g02680.t01	Wine grape	nucleus	32.75	44.07
HORVU1Hr1G090360.2	Barley	cytosol, mitochondrion, nucleus	43.32	43.54
Zm00001d011495_P001	Maize	cytosol	42.82	43.15
Zm00001d044015_P001	Maize	cytosol	44.08	42.68
GSMUA_Achr2P19980_001	Banana	vacuole	5.79	42.59
Solyc08g082260.1.1	Tomato	nucleus	38.79	39.19
Solyc03g006940.1.1	Tomato	nucleus	32.75	37.68
Solyc06g076400.2.1	Tomato	nucleus	38.79	37.56
Solyc03g006950.1.1	Tomato	cytosol, nucleus, peroxisome	32.75	37.46
Solyc03g096670.2.1	Tomato	nucleus	38.04	37.19
KXG33023	Sorghum	nucleus	44.08	36.92
Solyc05g052980.2.1	Tomato	nucleus	38.04	36.92
Solyc03g006960.2.1	Tomato	nucleus	34.51	36.44
Solyc08g062640.2.1	Tomato	cytosol	12.09	35.82
Solyc03g006930.1.1	Tomato	cytosol	29.22	35.05
Solyc06g082700.1.1	Tomato	cytosol, peroxisome, plastid	10.33	28.87
Solyc07g040990.2.1	Tomato	cytosol	36.02	26.68
Solyc12g096020.1.1	Tomato	cytosol, nucleus, plastid	34.01	26.57
Solyc06g084100.2.1	Tomato	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	16.88	25.19
Solyc08g062650.2.1	Tomato	extracellular	26.7	22.6
Solyc09g065650.2.1	Tomato	mitochondrion	16.62	7.07

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932
InterPro:IPR036457	UniProt:K4BEE6	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:Solyc03g007230.2	EnsemblPlants:Solyc03g007230.2.1	UniParc:UPI0001FBE258	SEG:seg	:

Description

No Description!

Coordinates

chr3:+:1792295..1794884

Molecular Weight (calculated)

43982.0 Da

IEP (calculated)

5.794

GRAVY (calculated)

-0.424

Length

397 amino acids

Sequence
(BLAST)

001: MIDNVKGMPP ATEKGCRLTA LIDSGGLAEV DLSEKEQNST RRRRLDERLL KSTTELPENF DVFADDYRHC KRKKSTVTDT DDHRVQLALS SEVKKVRESL
101: VTCCSHGSIS LIGRRREMED AVAIYPCFFS EGGGGGSRRY DYFGVYDGHG GSRVANVCRD FLHRLVIQQV SEGEDYDGKS INWEKVMTES FRKMDEKVNK
201: EGAEMATIGS TAVVAVVGVE EFVVANCGDS RAVLSRAGVA VPLSIDHKPD RPDELDRIEN SGGKVINWNG QRVLGVLATS RSIGDMYLKP YVIPDPEVIV
301: SKRSDEDEFL ILASDGLWDV IPNDVACDVT RRCLNGQTFR RCDQQTKSYK RDEGVKESLA ARAASFLAEL AIARGSRDNI SVIVVNLNRS VRSSIDS

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.