Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078131 | Potato | golgi, vacuole | 81.69 | 37.06 |
| Solyc06g084100.2.1 | Tomato | endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole | 41.55 | 22.18 |
| VIT_00s0179g00110.t01 | Wine grape | vacuole | 50.0 | 19.45 |
| Solyc08g062640.2.1 | Tomato | cytosol | 13.38 | 14.18 |
| Solyc03g006930.1.1 | Tomato | cytosol | 30.99 | 13.29 |
| Solyc03g006950.1.1 | Tomato | cytosol, nucleus, peroxisome | 31.69 | 12.97 |
| Solyc03g006940.1.1 | Tomato | nucleus | 30.99 | 12.75 |
| Solyc08g082260.1.1 | Tomato | nucleus | 30.99 | 11.2 |
| Solyc03g006960.2.1 | Tomato | nucleus | 29.58 | 11.17 |
| Solyc06g076400.2.1 | Tomato | nucleus | 30.28 | 10.49 |
| Solyc03g007230.2.1 | Tomato | cytosol | 28.87 | 10.33 |
| Solyc05g052980.2.1 | Tomato | nucleus | 29.58 | 10.27 |
| Solyc03g096670.2.1 | Tomato | nucleus | 28.87 | 10.1 |
| Solyc06g051940.2.1 | Tomato | cytosol | 30.99 | 9.95 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 30.28 | 8.46 |
| Solyc07g040990.2.1 | Tomato | cytosol | 26.76 | 7.09 |
| Solyc09g065650.2.1 | Tomato | mitochondrion | 46.48 | 7.07 |
| Solyc08g062650.2.1 | Tomato | extracellular | 21.83 | 6.61 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.10 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:K4CAC5 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF397 |
| SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:Solyc06g082700.1 | EnsemblPlants:Solyc06g082700.1.1 | UniParc:UPI00027659CE | : |
Description
No Description!
Coordinates
chr6:+:48429763..48430191
Molecular Weight (calculated)
15813.9 Da
IEP (calculated)
6.525
GRAVY (calculated)
-0.125
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNSANSLWN PNLIPDLLQK QVLVANVGDS KAFICSGKLA KELTEDHNAD RLDERARVEA SGGKFTFYTN YVPLLNGHFP MTRAIGDVTL KSVGIIATPE
101: VTDWLNLTSK DEFLVVASDG IFESLSTKKF VSFYMKQRTI QI
101: VTDWLNLTSK DEFLVVASDG IFESLSTKKF VSFYMKQRTI QI
0001: MTSSIKSSLL NLGLLIIFFV FFFLVINCRG ESSTCLAVYK QGGAPAVFQS PKCPRWILQN WGSPTHSGAG RCHTAAIQGR RNYQEDRLLC ALDLRIPFPG
0101: KTGTPKDVLV GIAAVFDGHN GAEASDMASK LLLDYFALHI NFLLDATFSA MTRKLIGRFP TKGDHSVILH GVSRDEIMHL YNLDFQMQFR DSLPLHFDDS
0201: LPLDIMKEAL LRAIHDIDVT FTKEASNRKL NSGSTATIAL IADGQLMVAS IGDSKALLCS EKFETLEEAR ATLVKLYRER RRNRGSSPSR FSDFKLEHGN
0301: GLLRFIAKEL TKDHHPNRED EKIRVEAAGG YVTEWAGVPR VNGQLTVSRA IGDLTYRSYG VISAPEVMDW QPLVANDSFL VVSSDGIFEK LEVQEVCDLL
0401: WEVNNQTSSG AGVPSYCSIS LADCLVNTAF EKGSMDNMAA VVVPLKSNLV TQLQRKEQSM NDNKDKIASA LPCSNCTLPL PNDINLGPLQ LKQAQPLGTM
0501: FNRLLVEVKN GSFCRFYMSE NLIGASQGQM NNLNGYMGDL PQVLPASAEQ FPGWCLPSGT ATNENQDQCI NPDSFATFLG LLESVPLHGF GAKNGTDEIP
0601: FPDSSYVLKK KFGRGAFGEV WLAFHWDCYQ GNNATSSINE DENTSKNGVH NDTDGPNNSF ILKRIMVERG PTVYLSGLRE KHFGELFLNA YNVSESSSAT
0701: QASSSQAASS ELGLSEEGLK HIARYIEYFE SRYNDIWLVF HHEGVSLSKL MYTVEEAEIS SEKAEEASHG QILRPSKWWT WLKTTESGKE EMRRIIWQLL
0801: LGLKACHDRN ITHRDIKPEN MVICLEDIKS GRCLKGVPNG DQNFKTNMRI IDFGSALDEY TIKHLYGSTG PSRAEQTHDY APPEAILNSS WHHGPTSLTL
0901: KYDMWSVGVV MLEMILGSPN VFEISSVTRA LLDQHIRGWS ENFKELAYKL RSLMEMCILI PGSSLKHGGA SSKQGGISLA SWKCSEEFFA EQIKSRDPLK
1001: IGFPNVWALR RTE
0101: KTGTPKDVLV GIAAVFDGHN GAEASDMASK LLLDYFALHI NFLLDATFSA MTRKLIGRFP TKGDHSVILH GVSRDEIMHL YNLDFQMQFR DSLPLHFDDS
0201: LPLDIMKEAL LRAIHDIDVT FTKEASNRKL NSGSTATIAL IADGQLMVAS IGDSKALLCS EKFETLEEAR ATLVKLYRER RRNRGSSPSR FSDFKLEHGN
0301: GLLRFIAKEL TKDHHPNRED EKIRVEAAGG YVTEWAGVPR VNGQLTVSRA IGDLTYRSYG VISAPEVMDW QPLVANDSFL VVSSDGIFEK LEVQEVCDLL
0401: WEVNNQTSSG AGVPSYCSIS LADCLVNTAF EKGSMDNMAA VVVPLKSNLV TQLQRKEQSM NDNKDKIASA LPCSNCTLPL PNDINLGPLQ LKQAQPLGTM
0501: FNRLLVEVKN GSFCRFYMSE NLIGASQGQM NNLNGYMGDL PQVLPASAEQ FPGWCLPSGT ATNENQDQCI NPDSFATFLG LLESVPLHGF GAKNGTDEIP
0601: FPDSSYVLKK KFGRGAFGEV WLAFHWDCYQ GNNATSSINE DENTSKNGVH NDTDGPNNSF ILKRIMVERG PTVYLSGLRE KHFGELFLNA YNVSESSSAT
0701: QASSSQAASS ELGLSEEGLK HIARYIEYFE SRYNDIWLVF HHEGVSLSKL MYTVEEAEIS SEKAEEASHG QILRPSKWWT WLKTTESGKE EMRRIIWQLL
0801: LGLKACHDRN ITHRDIKPEN MVICLEDIKS GRCLKGVPNG DQNFKTNMRI IDFGSALDEY TIKHLYGSTG PSRAEQTHDY APPEAILNSS WHHGPTSLTL
0901: KYDMWSVGVV MLEMILGSPN VFEISSVTRA LLDQHIRGWS ENFKELAYKL RSLMEMCILI PGSSLKHGGA SSKQGGISLA SWKCSEEFFA EQIKSRDPLK
1001: IGFPNVWALR RTE
Arabidopsis Description
Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G63340]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.