Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400019552 | Potato | cytosol, peroxisome, plastid | 26.06 | 91.59 |
| Solyc03g006940.1.1 | Tomato | nucleus | 48.4 | 52.75 |
| Solyc03g006950.1.1 | Tomato | cytosol, nucleus, peroxisome | 48.14 | 52.16 |
| GSMUA_Achr8P14370_001 | Banana | cytosol | 39.89 | 51.02 |
| GSMUA_Achr11P... | Banana | cytosol | 34.04 | 50.59 |
| Solyc03g006930.1.1 | Tomato | cytosol | 39.36 | 44.71 |
| HORVU7Hr1G008370.1 | Barley | cytosol, peroxisome | 11.44 | 40.95 |
| AT5G51760.1 | Thale cress | cytosol | 44.95 | 40.62 |
| CDY38877 | Canola | cytosol | 42.82 | 39.66 |
| GSMUA_Achr11P... | Banana | cytosol | 42.55 | 39.51 |
| Bra029160.1-P | Field mustard | cytosol | 43.35 | 39.0 |
| CDY32620 | Canola | cytosol | 39.89 | 38.36 |
| Solyc06g076400.2.1 | Tomato | nucleus | 41.22 | 37.8 |
| Solyc03g096670.2.1 | Tomato | nucleus | 40.43 | 37.44 |
| Solyc05g052980.2.1 | Tomato | nucleus | 40.69 | 37.41 |
| Solyc08g062640.2.1 | Tomato | cytosol | 13.03 | 36.57 |
| Os04t0167875-00 | Rice | nucleus, peroxisome, plastid | 8.24 | 36.05 |
| Solyc03g007230.2.1 | Tomato | cytosol | 36.44 | 34.51 |
| TraesCS7D01G042600.1 | Wheat | cytosol | 31.38 | 34.4 |
| HORVU7Hr1G008520.2 | Barley | cytosol | 15.16 | 34.34 |
| TraesCS2A01G000400.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 39.36 | 34.02 |
| HORVU2Hr1G000090.2 | Barley | cytosol | 40.96 | 33.92 |
| TraesCS7D01G042300.1 | Wheat | cytosol | 33.24 | 33.78 |
| TraesCS2D01G000300.1 | Wheat | cytosol | 40.16 | 33.26 |
| Solyc08g082260.1.1 | Tomato | nucleus | 34.57 | 33.08 |
| HORVU7Hr1G008470.2 | Barley | cytosol | 32.71 | 33.06 |
| TraesCS4A01G443500.1 | Wheat | mitochondrion | 31.91 | 32.7 |
| TraesCS4A01G443400.1 | Wheat | mitochondrion | 31.91 | 32.7 |
| TraesCS2B01G023600.1 | Wheat | cytosol | 39.89 | 32.61 |
| Zm00001d025055_P001 | Maize | cytosol | 40.16 | 32.54 |
| EES11811 | Sorghum | plastid | 41.22 | 31.7 |
| TraesCS7A01G048200.1 | Wheat | plastid | 30.32 | 31.15 |
| Solyc06g051940.2.1 | Tomato | cytosol | 35.37 | 30.09 |
| Solyc06g082700.1.1 | Tomato | cytosol, peroxisome, plastid | 11.17 | 29.58 |
| HORVU7Hr1G008560.2 | Barley | mitochondrion | 18.88 | 29.22 |
| Zm00001d004357_P001 | Maize | nucleus | 39.89 | 27.57 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 34.84 | 25.79 |
| HORVU7Hr1G008550.1 | Barley | cytosol | 15.16 | 25.22 |
| Solyc06g084100.2.1 | Tomato | endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole | 17.82 | 25.19 |
| Solyc07g040990.2.1 | Tomato | cytosol | 34.31 | 24.07 |
| Solyc08g062650.2.1 | Tomato | extracellular | 26.86 | 21.54 |
| Solyc09g065650.2.1 | Tomato | mitochondrion | 17.02 | 6.85 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 |
| InterPro:IPR001932 | InterPro:IPR036457 | UniProt:K4BEB9 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF537 |
| SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:Solyc03g006960.2 | EnsemblPlants:Solyc03g006960.2.1 | UniParc:UPI0002767D72 | SEG:seg |
Description
No Description!
Coordinates
chr3:-:1520013..1522985
Molecular Weight (calculated)
41682.8 Da
IEP (calculated)
7.540
GRAVY (calculated)
-0.392
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSDKDDYSE KCRMRRRHRR IQMRRQHHPN LLSYLGQGIF EAGKMEASSS SREPEATGPV VGAISIPGRQ RVMEDTISIR PNLCSPEINR CRPVDFFAVY
101: DGHGGRHVAS MCKERMHEVL EEELMRMKNN QDTGRQPLEG QRMEEAWRRV FKSCFLKIDE MASCICSECG SVGYECGCPL SVLKLTGSTA VVVVLTDETI
201: IVANCGDSRA VLSRSGSAIP LSYDHKPDKR EERARIEARG GRVVFTDGAR VEGVLSMSRA IGDNNLKPYI TSEPEMTFTK REAEDECLIL ASDGLWDVVS
301: SDIACAVGRE CLRQRDPSGN FSSRLSSVEG DSRGAMFSSR RACSAAALLT RLALGRNSCD NISVIVVDLK TNHSAV
101: DGHGGRHVAS MCKERMHEVL EEELMRMKNN QDTGRQPLEG QRMEEAWRRV FKSCFLKIDE MASCICSECG SVGYECGCPL SVLKLTGSTA VVVVLTDETI
201: IVANCGDSRA VLSRSGSAIP LSYDHKPDKR EERARIEARG GRVVFTDGAR VEGVLSMSRA IGDNNLKPYI TSEPEMTFTK REAEDECLIL ASDGLWDVVS
301: SDIACAVGRE CLRQRDPSGN FSSRLSSVEG DSRGAMFSSR RACSAAALLT RLALGRNSCD NISVIVVDLK TNHSAV
001: MRRQAAVFGE PSSSRNRDRT DMEVYSSFDV PLRKQARRSE IGGLPADIGG FLAPPAASSC QKSEAPVWKG EETEDEPLYG IVSVMGRSRK MEDSVTVKPN
101: LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF KRMDEMATST CVCGTSVPLC NCDPREAAIS
201: GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA TSRAIGDRYL KPMVAWEPEV TFMRRESGDE
301: CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS SDNISVVVID LKNSSQ
101: LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF KRMDEMATST CVCGTSVPLC NCDPREAAIS
201: GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA TSRAIGDRYL KPMVAWEPEV TFMRRESGDE
301: CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS SDNISVVVID LKNSSQ
Arabidopsis Description
AHG1Probable protein phosphatase 2C 75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.