Factsheet for Solyc06g084100.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 3
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid, secretory
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g082700.1.1	Tomato	cytosol, peroxisome, plastid	22.18	41.55
VIT_00s0179g00110.t01	Wine grape	vacuole	51.88	37.81
Solyc08g062640.2.1	Tomato	cytosol	10.53	20.9
Solyc03g006950.1.1	Tomato	cytosol, nucleus, peroxisome	26.32	20.17
Solyc03g006940.1.1	Tomato	nucleus	25.94	20.0
Solyc08g082260.1.1	Tomato	nucleus	28.2	19.08
Solyc03g006930.1.1	Tomato	cytosol	23.68	19.03
Solyc03g006960.2.1	Tomato	nucleus	25.19	17.82
Solyc03g007230.2.1	Tomato	cytosol	25.19	16.88
Solyc05g052980.2.1	Tomato	nucleus	25.94	16.87
Solyc03g096670.2.1	Tomato	nucleus	25.19	16.5
Solyc06g076400.2.1	Tomato	nucleus	25.19	16.34
Solyc06g051940.2.1	Tomato	cytosol	24.81	14.93
Solyc12g096020.1.1	Tomato	cytosol, nucleus, plastid	25.94	13.58
Solyc07g040990.2.1	Tomato	cytosol	26.69	13.25
Solyc09g065650.2.1	Tomato	mitochondrion	42.86	12.21
Solyc08g062650.2.1	Tomato	extracellular	18.8	10.66

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.10	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4CAR5	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF397
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc06g084100.2	EnsemblPlants:Solyc06g084100.2.1	UniParc:UPI000276B7D8	SEG:seg

Description

No Description!

Coordinates

chr6:-:49341304..49343201

Molecular Weight (calculated)

29798.3 Da

IEP (calculated)

5.049

GRAVY (calculated)

-0.293

Length

266 amino acids

Sequence
(BLAST)

001: MASQKFFDYF LLHVVFNTYK NLFSHSKEHE QPGQNSLKFK VDDESTLGIL EKALLRTIQD IDSEFTQEAL KNEYISGSTA IVVLWMNGQI LVGNLGDSKA
101: LVCSRKTHFD QENEGDLVTT LQAKELTMDH HPDRDDEKAR IEAAGGVVLV VGVPRVNGIL AVSRSIGDIR LKRYGVFAEP EVTGWRRLSI EDWYVVIGSD
201: GIFERMSPQD VCDILHDNKD KIDSSSSLAD CIVHNAFRKG SGDNLSVIVI PLRQESPPSL EHNQQI

Best Arabidopsis Sequence Match ( AT3G63320.2 )
(BLAST)

001: MASQLLLDYF ALHIYFLLDA TFSKELTGKL PNSLMHLYDL DSQRFQDSLP LNFHLDILKE ALLRAIYDID ATFTKEASTR KLDSGSTATI ALIADGQLLV
101: ASIGDSKALL CSERYETPEE AKATLIKLYR ERKRNQDSSP SRFSDLKLEH RTGLMRFIAK ELTKDHHPDR EDEMLRVKAA GGYVTKWAGV PRVNGQLAVS
201: RSIGDLTYRS YGVISAPEVM DWQPLVANDS YLVVSSDGIF EKLEVQDACD RLWEVKNQTS FGAGVPSYCS ISLADCLVNT AFEKGSMDNM AAVVVPLKSN
301: LDWESQPKEQ SVGPSGFKMK NTYALPYGTF NPLQLKQTQP LSTMFNELLV EEENSSYYKL NGTFASYG

Arabidopsis Description

Putative protein phosphatase 2C 50 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1V8]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.