Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g006940.1.1 | Tomato | nucleus | 82.13 | 82.61 |
| PGSC0003DMT400090149 | Potato | cytosol | 78.1 | 81.63 |
| Solyc03g006960.2.1 | Tomato | nucleus | 52.16 | 48.14 |
| GSMUA_Achr11P... | Banana | cytosol | 34.58 | 47.43 |
| GSMUA_Achr8P14370_001 | Banana | cytosol | 39.48 | 46.6 |
| Solyc03g006930.1.1 | Tomato | cytosol | 43.8 | 45.92 |
| AT5G51760.1 | Thale cress | cytosol | 49.28 | 41.11 |
| HORVU7Hr1G008370.1 | Barley | cytosol, peroxisome | 12.39 | 40.95 |
| CDY38877 | Canola | cytosol | 47.26 | 40.39 |
| Bra029160.1-P | Field mustard | cytosol | 47.55 | 39.47 |
| HORVU7Hr1G008520.2 | Barley | cytosol | 18.44 | 38.55 |
| CDY32620 | Canola | cytosol | 42.94 | 38.11 |
| TraesCS7D01G042600.1 | Wheat | cytosol | 36.6 | 37.03 |
| Solyc08g062640.2.1 | Tomato | cytosol | 14.12 | 36.57 |
| Os04t0167875-00 | Rice | nucleus, peroxisome, plastid | 8.93 | 36.05 |
| TraesCS4A01G443500.1 | Wheat | mitochondrion | 37.46 | 35.42 |
| TraesCS4A01G443400.1 | Wheat | mitochondrion | 37.46 | 35.42 |
| HORVU7Hr1G008470.2 | Barley | cytosol | 37.46 | 34.95 |
| GSMUA_Achr11P... | Banana | cytosol | 40.63 | 34.81 |
| TraesCS7D01G042300.1 | Wheat | cytosol | 36.6 | 34.32 |
| Solyc05g052980.2.1 | Tomato | nucleus | 40.35 | 34.23 |
| TraesCS7A01G048200.1 | Wheat | plastid | 36.02 | 34.15 |
| Solyc03g096670.2.1 | Tomato | nucleus | 39.77 | 33.99 |
| Solyc03g007230.2.1 | Tomato | cytosol | 37.46 | 32.75 |
| TraesCS2A01G000400.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 40.63 | 32.41 |
| Solyc08g082260.1.1 | Tomato | nucleus | 36.31 | 32.06 |
| TraesCS2B01G023600.1 | Wheat | cytosol | 42.36 | 31.96 |
| TraesCS2D01G000300.1 | Wheat | cytosol | 41.79 | 31.94 |
| Solyc06g076400.2.1 | Tomato | nucleus | 37.46 | 31.71 |
| Solyc06g082700.1.1 | Tomato | cytosol, peroxisome, plastid | 12.97 | 31.69 |
| HORVU2Hr1G000090.2 | Barley | cytosol | 40.92 | 31.28 |
| HORVU7Hr1G008560.2 | Barley | mitochondrion | 21.9 | 31.28 |
| Zm00001d025055_P001 | Maize | cytosol | 40.92 | 30.6 |
| EES11811 | Sorghum | plastid | 42.94 | 30.47 |
| Solyc06g051940.2.1 | Tomato | cytosol | 38.04 | 29.86 |
| HORVU7Hr1G008550.1 | Barley | cytosol | 18.73 | 28.76 |
| Solyc06g084100.2.1 | Tomato | endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole | 20.17 | 26.32 |
| Zm00001d004357_P001 | Maize | nucleus | 40.92 | 26.1 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 36.02 | 24.61 |
| Solyc07g040990.2.1 | Tomato | cytosol | 35.16 | 22.76 |
| Solyc08g062650.2.1 | Tomato | extracellular | 27.09 | 20.04 |
| Solyc09g065650.2.1 | Tomato | mitochondrion | 20.75 | 7.71 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:K4BEB8 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF537 |
| SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:Solyc03g006950.1 | EnsemblPlants:Solyc03g006950.1.1 | UniParc:UPI0002767D71 | SEG:seg |
Description
No Description!
Coordinates
chr3:+:1514933..1517687
Molecular Weight (calculated)
38051.6 Da
IEP (calculated)
6.389
GRAVY (calculated)
-0.147
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATLCFHTI RSKMSDSNSD SDSTTSPIGA PEAAVPVVGA ISLIGRRNSM EDAISVWPNL CSPYINQHRP IDFFAVYDGH CGPHVAELCR DRMYLILLQE
101: LMMAKTIITG SSSSNNNNNT RLSQKQLERE RVKEMWKRVL KSCFERIDEM AFDTCYKCGI GVPCGCPPHY YGIGGSTALL TILTEKTIIV ANCGDSRAVL
201: CTGGRAIPLS IDHKPDRPEE RARIEACGGH VDFDCYARVL GILAMSRAIG AKYLKEYITS EPEFTFTKRE AEDEFLILAS DGLWKAVSND DACKVARECL
301: QKEKPFGSGD VFSSPSNAAA ALLTRLAMGR GSQDNISVIV VDLKITS
101: LMMAKTIITG SSSSNNNNNT RLSQKQLERE RVKEMWKRVL KSCFERIDEM AFDTCYKCGI GVPCGCPPHY YGIGGSTALL TILTEKTIIV ANCGDSRAVL
201: CTGGRAIPLS IDHKPDRPEE RARIEACGGH VDFDCYARVL GILAMSRAIG AKYLKEYITS EPEFTFTKRE AEDEFLILAS DGLWKAVSND DACKVARECL
301: QKEKPFGSGD VFSSPSNAAA ALLTRLAMGR GSQDNISVIV VDLKITS
001: MRRQAAVFGE PSSSRNRDRT DMEVYSSFDV PLRKQARRSE IGGLPADIGG FLAPPAASSC QKSEAPVWKG EETEDEPLYG IVSVMGRSRK MEDSVTVKPN
101: LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF KRMDEMATST CVCGTSVPLC NCDPREAAIS
201: GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA TSRAIGDRYL KPMVAWEPEV TFMRRESGDE
301: CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS SDNISVVVID LKNSSQ
101: LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF KRMDEMATST CVCGTSVPLC NCDPREAAIS
201: GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA TSRAIGDRYL KPMVAWEPEV TFMRRESGDE
301: CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS SDNISVVVID LKNSSQ
Arabidopsis Description
AHG1Probable protein phosphatase 2C 75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.