Factsheet for PGSC0003DMT400090149

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g006940.1.1	Tomato	nucleus	85.24	82.03
Solyc03g006950.1.1	Tomato	cytosol, nucleus, peroxisome	81.63	78.1
PGSC0003DMT400019552	Potato	cytosol, peroxisome, plastid	18.37	57.01
GSMUA_Achr11P...	Banana	cytosol	37.35	49.01
PGSC0003DMT400091100	Potato	cytosol, nucleus, plastid	50.3	48.83
GSMUA_Achr8P14370_001	Banana	cytosol	42.17	47.62
PGSC0003DMT400094534	Potato	cytosol	28.01	46.5
HORVU7Hr1G008370.1	Barley	cytosol, peroxisome	13.86	43.81
PGSC0003DMT400021210	Potato	cytosol, nucleus, peroxisome	11.45	42.22
AT5G51760.1	Thale cress	cytosol	52.71	42.07
CDY38877	Canola	cytosol	50.9	41.63
Os04t0167875-00	Rice	nucleus, peroxisome, plastid	10.54	40.7
Bra029160.1-P	Field mustard	cytosol	51.2	40.67
CDY32620	Canola	cytosol	46.69	39.64
HORVU7Hr1G008520.2	Barley	cytosol	19.28	38.55
TraesCS7D01G042600.1	Wheat	cytosol	37.65	36.44
GSMUA_Achr11P...	Banana	cytosol	43.37	35.56
HORVU7Hr1G008470.2	Barley	cytosol	39.76	35.48
TraesCS4A01G443400.1	Wheat	mitochondrion	39.16	35.42
TraesCS4A01G443500.1	Wheat	mitochondrion	39.16	35.42
TraesCS7D01G042300.1	Wheat	cytosol	38.86	34.86
PGSC0003DMT400069947	Potato	cytosol	43.37	34.45
TraesCS7A01G048200.1	Wheat	plastid	37.95	34.43
PGSC0003DMT400043146	Potato	nucleus	41.87	33.9
PGSC0003DMT400023517	Potato	nucleus	40.06	33.33
TraesCS2A01G000400.1	Wheat	cytosol, nucleus, peroxisome, plastid	43.67	33.33
TraesCS2D01G000300.1	Wheat	cytosol	45.18	33.04
PGSC0003DMT400077989	Potato	cytosol	40.66	32.93
TraesCS2B01G023600.1	Wheat	cytosol	45.18	32.61
HORVU2Hr1G000090.2	Barley	cytosol	44.58	32.6
PGSC0003DMT400050448	Potato	cytosol	38.55	32.16
EES11811	Sorghum	plastid	47.29	32.11
Zm00001d025055_P001	Maize	cytosol	44.28	31.68
HORVU7Hr1G008560.2	Barley	mitochondrion	22.59	30.86
HORVU7Hr1G008550.1	Barley	cytosol	18.98	27.88
Zm00001d004357_P001	Maize	nucleus	44.88	27.39
PGSC0003DMT400078131	Potato	golgi, vacuole	25.0	26.52
PGSC0003DMT400006608	Potato	plastid	43.37	26.42
PGSC0003DMT400075333	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	40.36	25.0
PGSC0003DMT400046382	Potato	cytosol	40.06	24.45
PGSC0003DMT400057134	Potato	mitochondrion	18.07	20.55
PGSC0003DMT400049695	Potato	extracellular	2.71	8.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:M1DJR9	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400039720	PGSC:PGSC0003DMG400039720
EnsemblPlants:PGSC0003DMT400090149	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF537	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000294F2F8
SEG:seg	:	:	:	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400039720]

Coordinates

chr3:-:41259803..41262133

Molecular Weight (calculated)

36622.9 Da

IEP (calculated)

5.771

GRAVY (calculated)

-0.195

Length

332 amino acids

Sequence
(BLAST)

001: MSDSNSATSG TGAPEEPVPL VGSISLIGRR SSMEDEISVW PNLCSPYINK HRPIDFFAVY DGHGGPHVAG LCRSRMYLIL LEELMMTRTI ISGSTSNNDN
101: ISRQRRKQLE WERVKEVWKR VLKSCFERID EMAFVTCYEC GIGVPCGCPP QNYGLGGSTA VLAILTDKTI IVANCGDSRA VLCRGRRAIP LSIDHKPDRP
201: EERARIEACG GHVDFDDCAR VLGILATSRA IGDKYLKKYI ISEPEFTFTK REAEDECLIL ASDGLWNVIS NEEACQVARE CLQKEKPSGR GDVFSSPSRA
301: AAALLTRLAM GRGSEDNISV IVVDLKIDYI EV

Best Arabidopsis Sequence Match ( AT5G51760.2 )
(BLAST)

001: MRRQAAVFGE PSSSRNRDRT DMEVYSSFDV PLRKQARRSE IGGLPADIGG FLAPPAASSC QKSEAPVWKG EETEDEPLYG IVSVMGRSRK MEDSVTVKPN
101: LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF KRMDEMATST CVCGTSVPLC NCDPREAAIS
201: GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA TSRAIGDRYL KPMVAWEPEV TFMRRESGDE
301: CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS SDNISVVVID LKNSSQ

Arabidopsis Description

AHG1Probable protein phosphatase 2C 75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.