Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g040990.2.1 | Tomato | cytosol | 92.65 | 94.03 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 12.32 | 74.44 |
| CDY50002 | Canola | cytosol | 19.12 | 60.82 |
| CDY42756 | Canola | cytosol | 38.79 | 51.09 |
| Bra019121.1-P | Field mustard | cytosol | 38.42 | 50.61 |
| CDX92752 | Canola | cytosol | 37.87 | 50.24 |
| CDX94382 | Canola | cytosol | 38.79 | 50.24 |
| CDY50003 | Canola | nucleus | 37.68 | 50.0 |
| AT5G57050.1 | Thale cress | cytosol | 38.6 | 49.65 |
| Bra013945.1-P | Field mustard | cytosol | 38.6 | 49.41 |
| CDX89368 | Canola | cytosol | 38.6 | 49.3 |
| Bra010441.1-P | Field mustard | cytosol | 38.24 | 49.29 |
| CDY38260 | Canola | cytosol | 38.05 | 49.05 |
| CDY14318 | Canola | nucleus | 38.05 | 49.05 |
| Bra002766.1-P | Field mustard | cytosol | 38.05 | 49.05 |
| CDY54381 | Canola | cytosol, mitochondrion, plastid | 37.68 | 48.46 |
| AT4G26080.1 | Thale cress | cytosol, nucleus, plastid | 38.24 | 47.93 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 44.12 | 44.78 |
| PGSC0003DMT400094534 | Potato | cytosol | 16.36 | 44.5 |
| PGSC0003DMT400006608 | Potato | plastid | 44.49 | 44.4 |
| PGSC0003DMT400019552 | Potato | cytosol, peroxisome, plastid | 8.27 | 42.06 |
| KRH19237 | Soybean | cytosol, nucleus, peroxisome | 41.36 | 41.98 |
| KRH12454 | Soybean | cytosol | 40.62 | 41.94 |
| KRH02667 | Soybean | cytosol, nucleus, peroxisome | 41.36 | 41.82 |
| KRH37441 | Soybean | cytosol | 39.89 | 41.57 |
| PGSC0003DMT400090149 | Potato | cytosol | 24.45 | 40.06 |
| PGSC0003DMT400077989 | Potato | cytosol | 27.02 | 35.85 |
| PGSC0003DMT400091100 | Potato | cytosol, nucleus, plastid | 22.43 | 35.67 |
| PGSC0003DMT400043146 | Potato | nucleus | 26.84 | 35.61 |
| PGSC0003DMT400023517 | Potato | nucleus | 25.92 | 35.34 |
| PGSC0003DMT400069947 | Potato | cytosol | 27.02 | 35.17 |
| PGSC0003DMT400050448 | Potato | cytosol | 23.35 | 31.91 |
| PGSC0003DMT400078131 | Potato | golgi, vacuole | 12.87 | 22.36 |
| PGSC0003DMT400057134 | Potato | mitochondrion | 10.48 | 19.52 |
| PGSC0003DMT400049695 | Potato | extracellular | 2.21 | 10.91 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | EntrezGene:102591856 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:M1BJ08 | PFAM:PF00481 |
| EnsemblPlantsGene:PGSC0003DMG400018004 | PGSC:PGSC0003DMG400018004 | EnsemblPlants:PGSC0003DMT400046382 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF516 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI00029522B6 | RefSeq:XP_006342331.1 | SEG:seg | : | : |
Description
Abscisic insensitive 1B [Source:PGSC_GENE;Acc:PGSC0003DMG400018004]
Coordinates
chr7:+:37156980..37160239
Molecular Weight (calculated)
60084.6 Da
IEP (calculated)
5.300
GRAVY (calculated)
-0.281
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEMFPALTV SYKQGKLIYD ESVLPTCIDF AEYELIPNTT SLLSEPNKCK LPCSVSNHSV SRDKANLFMT VADCHEIRKG KSFSSTVVAN GNCLIASEVK
101: DGRSMDNNLI SPTDELLGNM TCSDSLVDEC GGMPNQECTD LEVKVGRTPP RNEDKKVGVS QILRKSFSCN LAKELVNESE LVSDLVSTMV VGAEDYKRKL
201: SPSHLETSQE IKISRPNAFC FDSVPLWGII TIQGKRPEME DTAIALPRFL RIPSHILTDA PVSHALSQTL TAHLYGVYDG HGGSQQVANY CHERLHMVLA
301: QEIDIMKEDS HNGSVNWKEQ WSKAFLNCFC RVDDEVGGFC SETDGIEPDL SVIAPEAVGS TAVVAVVSPT HIIVANCGDS RAVLCRGKLP MPLSIDHKPN
401: REDECSRIEE LGGKVINWDG HRVSGVLAVS RSIGDRYLRP YVIPDPEMMF VPRAKEDDCL ILASDGLWDV LTNEEACDVA RRRILLWHKK NGGTLSSERG
501: ENVDPAAQDA AEYLTRVALQ RGSRDNISVI VVDLKAQRKF KKKT
101: DGRSMDNNLI SPTDELLGNM TCSDSLVDEC GGMPNQECTD LEVKVGRTPP RNEDKKVGVS QILRKSFSCN LAKELVNESE LVSDLVSTMV VGAEDYKRKL
201: SPSHLETSQE IKISRPNAFC FDSVPLWGII TIQGKRPEME DTAIALPRFL RIPSHILTDA PVSHALSQTL TAHLYGVYDG HGGSQQVANY CHERLHMVLA
301: QEIDIMKEDS HNGSVNWKEQ WSKAFLNCFC RVDDEVGGFC SETDGIEPDL SVIAPEAVGS TAVVAVVSPT HIIVANCGDS RAVLCRGKLP MPLSIDHKPN
401: REDECSRIEE LGGKVINWDG HRVSGVLAVS RSIGDRYLRP YVIPDPEMMF VPRAKEDDCL ILASDGLWDV LTNEEACDVA RRRILLWHKK NGGTLSSERG
501: ENVDPAAQDA AEYLTRVALQ RGSRDNISVI VVDLKAQRKF KKKT
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.