Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19237 | Soybean | cytosol, nucleus, peroxisome | 93.12 | 93.47 |
| KRH12454 | Soybean | cytosol | 63.2 | 64.52 |
| KRH37441 | Soybean | cytosol | 61.34 | 63.22 |
| CDY50002 | Canola | cytosol | 19.7 | 61.99 |
| CDY42756 | Canola | cytosol | 40.89 | 53.27 |
| CDX92752 | Canola | cytosol | 40.52 | 53.17 |
| Bra019121.1-P | Field mustard | cytosol | 40.52 | 52.78 |
| CDY50003 | Canola | nucleus | 39.78 | 52.2 |
| CDX94382 | Canola | cytosol | 39.96 | 51.19 |
| Bra010441.1-P | Field mustard | cytosol | 40.15 | 51.18 |
| CDX89368 | Canola | cytosol | 40.52 | 51.17 |
| Bra013945.1-P | Field mustard | cytosol | 40.33 | 51.06 |
| AT5G57050.1 | Thale cress | cytosol | 39.96 | 50.83 |
| AT4G26080.1 | Thale cress | cytosol, nucleus, plastid | 40.15 | 49.77 |
| CDY14318 | Canola | nucleus | 39.03 | 49.76 |
| CDY38260 | Canola | cytosol | 38.66 | 49.29 |
| Bra002766.1-P | Field mustard | cytosol | 38.66 | 49.29 |
| CDY54381 | Canola | cytosol, mitochondrion, plastid | 38.1 | 48.46 |
| KRH05300 | Soybean | cytosol | 46.65 | 44.98 |
| KRH61549 | Soybean | cytosol | 44.98 | 44.49 |
| KRH52222 | Soybean | cytosol | 44.8 | 44.3 |
| KRH15739 | Soybean | cytosol | 45.54 | 43.99 |
| KRH77641 | Soybean | plastid | 25.28 | 41.98 |
| PGSC0003DMT400046382 | Potato | cytosol | 41.82 | 41.36 |
| Solyc07g040990.2.1 | Tomato | cytosol | 40.15 | 40.3 |
| KRH27848 | Soybean | nucleus | 24.72 | 39.58 |
| KRG94219 | Soybean | plastid | 27.32 | 38.99 |
| KRH73525 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 7.62 | 38.68 |
| KRH15068 | Soybean | cytosol | 28.62 | 38.5 |
| KRH31027 | Soybean | cytosol | 28.62 | 38.4 |
| KRG97855 | Soybean | cytosol | 28.44 | 38.25 |
| KRH73067 | Soybean | cytosol | 28.44 | 37.59 |
| KRH16556 | Soybean | plastid | 26.95 | 37.56 |
| KRH60215 | Soybean | cytoskeleton, cytosol, nucleus | 26.21 | 36.72 |
| KRH41498 | Soybean | nucleus | 26.21 | 36.62 |
| KRH71372 | Soybean | vacuole | 17.1 | 8.57 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | EntrezGene:100802159 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 |
| EMBL:ACUP02010313 | EnsemblPlantsGene:GLYMA_17G052500 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 | UniProt:I1MSE4 | InterPro:IPR001932 |
| InterPro:IPR036457 | EnsemblPlants:KRH02667 | ProteinID:KRH02667 | ProteinID:KRH02667.1 | ProteinID:KRH02668.1 | ProteinID:KRH02669.1 |
| PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF373 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI000233F1DA |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:3977763..3982066
Molecular Weight (calculated)
58552.0 Da
IEP (calculated)
4.719
GRAVY (calculated)
-0.374
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEISSSVAV PFTLGVGNLI QKESAVTTHM EITGLKLMAN TAAAALMLNP AVECLKENQV GAAALVSEMV IECESNWVLN ESHNQAIKED ELMLAVDFQS
101: LHSSSSQSVA NGKSDPCREE AAALKSSFSE IDSPIMIKVD DDVDGKSGIS ELCPSMKPPV EETVSVAMDI TSEDQSGSDE SDPKPSAVLL DQLPGESKTW
201: RTGNPNALEL NSGPLWGCSS ICGMRQEMED AISVKPRLFQ VSSQMLVNDH VNENEKQSLA HFFAVYDGHG GLQVANYCQE RLHSKLIEEI ETAQSTSAET
301: NGRGDWQDQW KKAFINCFQK MDDDVGGIGA SNRGNNSGGS ESNIKTVAPE TAGSTAVVAI LSQTHIIVAN CGDSRTVLYR GKEAMPLSSD HKPNREDEWA
401: RIEAAGGRVI HWKGYRVLGV LAMSRSIGDR YLKPWVIPEP EVNIVRREKN DECLILASDG LWDVMTNEEA CEVANKRILL WHKKFGDNGP TGRSEGADPA
501: AQSAAEYLTK LAIHRGSQDN ISVIVIDLKA QRKIKRKP
101: LHSSSSQSVA NGKSDPCREE AAALKSSFSE IDSPIMIKVD DDVDGKSGIS ELCPSMKPPV EETVSVAMDI TSEDQSGSDE SDPKPSAVLL DQLPGESKTW
201: RTGNPNALEL NSGPLWGCSS ICGMRQEMED AISVKPRLFQ VSSQMLVNDH VNENEKQSLA HFFAVYDGHG GLQVANYCQE RLHSKLIEEI ETAQSTSAET
301: NGRGDWQDQW KKAFINCFQK MDDDVGGIGA SNRGNNSGGS ESNIKTVAPE TAGSTAVVAI LSQTHIIVAN CGDSRTVLYR GKEAMPLSSD HKPNREDEWA
401: RIEAAGGRVI HWKGYRVLGV LAMSRSIGDR YLKPWVIPEP EVNIVRREKN DECLILASDG LWDVMTNEEA CEVANKRILL WHKKFGDNGP TGRSEGADPA
501: AQSAAEYLTK LAIHRGSQDN ISVIVIDLKA QRKIKRKP
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.