CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77641	Soybean	plastid	81.85	84.88
PGSC0003DMT400094534	Potato	cytosol	35.12	59.0
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	35.42	58.91
GSMUA_Achr2P19990_001	Banana	cytosol	36.61	52.12
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	45.54	45.27
TraesCS3A01G237800.1	Wheat	plastid	50.89	43.4
Os05t0572700-02	Rice	cytosol	49.11	43.31
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	50.6	43.26
HORVU3Hr1G059170.2	Barley	cytosol, nucleus	51.19	43.11
Zm00001d009626_P001	Maize	nucleus	47.92	42.93
KRG94219	Soybean	plastid	47.92	42.71
TraesCS1D01G419000.1	Wheat	nucleus	47.62	42.44
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	50.3	42.25
Os01t0656200-01	Rice	cytosol, nucleus, plastid	50.0	41.69
TraesCS1A01G411200.1	Wheat	nucleus	47.32	41.62
KRH16556	Soybean	plastid	47.62	41.45
TraesCS1B01G441400.1	Wheat	cytosol	47.32	41.41
Zm00001d011495_P001	Maize	cytosol	48.21	41.12
HORVU1Hr1G090360.2	Barley	cytosol, mitochondrion, nucleus	47.92	40.76
OQU78453	Sorghum	nucleus	47.92	40.76
GSMUA_Achr2P19980_001	Banana	vacuole	6.55	40.74
Solyc08g082260.1.1	Tomato	nucleus	47.62	40.71
TraesCS3B01G266200.1	Wheat	nucleus, peroxisome, plastid	50.0	40.58
GSMUA_Achr10P...	Banana	plastid	44.64	40.54
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	39.58	40.18
Zm00001d044015_P001	Maize	cytosol	48.81	40.0
KRH73525	Soybean	cytosol, mitochondrion, peroxisome, plastid	11.9	37.74
KRH15068	Soybean	cytosol	41.07	34.5
KRG97855	Soybean	cytosol	39.58	33.25
KRH73067	Soybean	cytosol	40.18	33.17
KRH31027	Soybean	cytosol	38.99	32.67
KXG33023	Sorghum	nucleus	45.83	32.49
KRH41498	Soybean	nucleus	37.2	32.47
KRH60215	Soybean	cytoskeleton, cytosol, nucleus	36.9	32.29
KRH37441	Soybean	cytosol	41.37	26.63
KRH12454	Soybean	cytosol	39.88	25.43
KRH02667	Soybean	cytosol, nucleus, peroxisome	39.58	24.72
KRH19237	Soybean	cytosol, nucleus, peroxisome	39.29	24.63
KRH05300	Soybean	cytosol	40.48	24.37
KRH15739	Soybean	cytosol	39.58	23.88
KRH61549	Soybean	cytosol	38.1	23.53
KRH52222	Soybean	cytosol	38.1	23.53
KRH71372	Soybean	vacuole	25.6	8.01

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100813248	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	EMBL:ACUP02006734
EnsemblPlantsGene:GLYMA_11G018000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1LG94	InterPro:IPR001932	InterPro:IPR036457
EnsemblPlants:KRH27848	ProteinID:KRH27848	ProteinID:KRH27848.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000233C53D	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:+:1246178..1247949

Molecular Weight (calculated)

36486.6 Da

IEP (calculated)

7.794

GRAVY (calculated)

-0.240

Length

336 amino acids

Sequence
(BLAST)

001: MHSTKSSTSD NININIKSKD KEIHRCYHNY RKKRKRPCQD AVAPTTEDDN CCTKAAAASH GFISVIGRRR VMEDAVKVVT GLVAAEQHCG GYDFFAVYDG
101: HGGTLVANAC RDRLHLLLAE EVVRGTAADK GLDWCQVMCS CFMKMDKGVG EENDDGGGNT MGSTAAVVVV GKEEIVVANC GDSRAVLCRG GVAVPLSRDH
201: KPDRPDEKER IEAAGGMVIN WNGNRVLGVL ATSRSIGDHC MKPFVISQPE TKVYARKESD EFVVVASDGL WDVVSNKFVC EVVRGCLHGK MRRNFKEDSI
301: ISYATEAAAL LAKLAMARGS KDNISVIVIQ LNTTTT

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.