Factsheet for TraesCS1A01G411200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G441400.1	Wheat	cytosol	96.07	95.57
TraesCS1D01G419000.1	Wheat	nucleus	93.98	95.23
HORVU1Hr1G090360.2	Barley	cytosol, mitochondrion, nucleus	92.93	89.87
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	39.53	74.75
Os05t0572700-02	Rice	cytosol	69.63	69.82
Zm00001d009626_P001	Maize	nucleus	65.71	66.93
OQU78453	Sorghum	nucleus	66.23	64.05
TraesCS3A01G237800.1	Wheat	plastid	65.18	63.2
PGSC0003DMT400094534	Potato	cytosol	29.58	56.5
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	48.43	54.73
KRH77641	Soybean	plastid	42.67	50.31
TraesCS5A01G183600.1	Wheat	peroxisome	44.24	48.42
KRH27848	Soybean	nucleus	41.62	47.32
VIT_16s0050g02680.t01	Wine grape	nucleus	35.08	45.42
KRG94219	Soybean	plastid	43.98	44.56
KRH16556	Soybean	plastid	44.76	44.3
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	45.29	44.02
Solyc03g007230.2.1	Tomato	cytosol	44.76	43.07
PGSC0003DMT400023517	Potato	nucleus	44.76	42.86
TraesCS3A01G362200.1	Wheat	nucleus, plastid	43.46	42.46
TraesCS4A01G094300.1	Wheat	nucleus	43.72	40.83
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	35.08	40.48
PGSC0003DMT400050448	Potato	cytosol	42.15	40.45
Solyc08g082260.1.1	Tomato	nucleus	40.58	39.44
TraesCS7A01G047900.1	Wheat	cytosol, mitochondrion, peroxisome	11.26	38.74
TraesCS1A01G358600.1	Wheat	cytosol	36.91	37.11
Solyc06g051940.2.1	Tomato	cytosol	42.93	37.1
TraesCS2A01G000400.1	Wheat	cytosol, nucleus, peroxisome, plastid	41.62	36.55
TraesCS4A01G443500.1	Wheat	mitochondrion	34.03	35.42
TraesCS4A01G443400.1	Wheat	mitochondrion	34.03	35.42
TraesCS1A01G441200.1	Wheat	cytosol	37.96	35.19
TraesCS3A01G249000.1	Wheat	cytosol	34.82	34.46
TraesCS7A01G048200.1	Wheat	plastid	32.98	34.43
TraesCS3A01G209200.1	Wheat	peroxisome, plasma membrane, vacuole	39.27	31.32
TraesCS3A01G144400.1	Wheat	peroxisome	24.61	30.72
TraesCS7A01G395000.1	Wheat	plasma membrane, vacuole	23.3	8.34

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006470	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009788	GO:GO:0009791	GO:GO:0009987	GO:GO:0010030
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS1A01G411200
EnsemblPlants:TraesCS1A01G411200.1	TIGR:cd00143	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1A:-:571986906..571989144

Molecular Weight (calculated)

40186.2 Da

IEP (calculated)

6.111

GRAVY (calculated)

-0.274

Length

382 amino acids

Sequence
(BLAST)

001: MRQAVGAGDE GLSRKVAVAA GDADGATAAR RRRRLELRPH GRKVASGEDE PAKKATDGSE SESSADVGRG IWLPACLSHG AVSVIGRRRE MEDAVAVERT
101: FLASSPDACG GGDEGSGGEE DFFAVYDGHG GARVAEACRE RMHVVLAEEV ERLRCRPGAR GWKEALEASF ARVDGEVVAG AGADDDEESR SRTVGSTAVV
201: AVVGRRRIVV ANCGDSRAVL SRGGVAVPLS TDHKPDRPDE LQRVEAAGGR VINWNGSRVL GVLSTSRSIG DYYLKPYVSA EPEVTAVERT GKDEFLVLAS
301: DGLWDVVSND EACRVARSCL TGRAAAVFPE SVAGRSAADA AALLAELAIT RGSKDNISVV VVELKRLKSR VGRRAIGGEV QL

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.