Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G375100.1 | Wheat | cytosol | 98.68 | 98.43 |
| TraesCS1D01G363500.1 | Wheat | cytosol | 98.42 | 97.91 |
| HORVU1Hr1G080290.6 | Barley | cytosol | 96.58 | 95.57 |
| Zm00001d038846_P001 | Maize | cytosol, nucleus | 77.63 | 79.73 |
| KXG22422 | Sorghum | cytosol, nucleus, plastid | 78.95 | 78.95 |
| TraesCS3A01G249000.1 | Wheat | cytosol | 65.53 | 64.51 |
| Zm00001d011132_P001 | Maize | cytosol, nucleus | 25.0 | 63.76 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 14.21 | 60.0 |
| Solyc08g062640.2.1 | Tomato | cytosol | 20.53 | 58.21 |
| TraesCS1A01G441200.1 | Wheat | cytosol | 52.11 | 48.06 |
| CDX96761 | Canola | cytosol | 43.68 | 47.43 |
| CDX83901 | Canola | cytosol | 43.16 | 46.86 |
| Bra016595.1-P | Field mustard | cytosol | 48.42 | 44.88 |
| TraesCS3A01G209200.1 | Wheat | peroxisome, plasma membrane, vacuole | 54.21 | 43.01 |
| TraesCS5A01G183600.1 | Wheat | peroxisome | 36.84 | 40.11 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 49.21 | 39.37 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 49.21 | 38.64 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 49.21 | 38.64 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 51.32 | 38.39 |
| PGSC0003DMT400006608 | Potato | plastid | 53.42 | 37.25 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 52.37 | 37.13 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 53.42 | 37.04 |
| AT1G72770.1 | Thale cress | cytosol | 49.74 | 36.99 |
| TraesCS1A01G411200.1 | Wheat | nucleus | 37.11 | 36.91 |
| TraesCS3A01G237800.1 | Wheat | plastid | 37.89 | 36.55 |
| CDY26234 | Canola | cytosol | 47.63 | 36.49 |
| KRH61549 | Soybean | cytosol | 51.58 | 36.03 |
| KRH52222 | Soybean | cytosol | 51.32 | 35.85 |
| Bra025964.1-P | Field mustard | cytosol | 47.89 | 35.83 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 51.84 | 35.75 |
| CDY48313 | Canola | cytosol | 46.84 | 35.53 |
| KRH05300 | Soybean | cytosol | 51.84 | 35.3 |
| TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 36.32 | 35.29 |
| AT1G17550.1 | Thale cress | cytosol | 47.37 | 35.23 |
| KRH15739 | Soybean | cytosol | 51.05 | 34.83 |
| TraesCS7A01G048200.1 | Wheat | plastid | 32.37 | 33.61 |
| TraesCS7A01G047900.1 | Wheat | cytosol, mitochondrion, peroxisome | 9.47 | 32.43 |
| TraesCS4A01G443400.1 | Wheat | mitochondrion | 31.32 | 32.43 |
| TraesCS4A01G443500.1 | Wheat | mitochondrion | 31.32 | 32.43 |
| TraesCS4A01G094300.1 | Wheat | nucleus | 34.47 | 32.03 |
| TraesCS2A01G000400.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 36.05 | 31.49 |
| Solyc08g062650.2.1 | Tomato | extracellular | 36.32 | 29.42 |
| TraesCS3A01G144400.1 | Wheat | peroxisome | 21.84 | 27.12 |
| TraesCS7A01G395000.1 | Wheat | plasma membrane, vacuole | 24.21 | 8.62 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | InterPro:IPR001932 |
| InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF517 | SMART:SM00332 | SUPFAM:SSF81606 |
| EnsemblPlantsGene:TraesCS1A01G358600 | EnsemblPlants:TraesCS1A01G358600.1 | TIGR:cd00143 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1A:-:540337131..540339603
Molecular Weight (calculated)
40837.3 Da
IEP (calculated)
5.515
GRAVY (calculated)
-0.329
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAAICGE DEPAPRDPER AAAGGGVERL DLGDGRAALV AGGKRSVYLM DCEPVWGCVA TPGRGGEMED ACAAVPRFAD VPVRLLARRR DLDGLGLDAD
101: ALRLPSHLFA VFDGHGGAEV SNYCRERLHV VLSKELRRPP SDLGEMSDVD MKEHWDDLFT RCFQTVDDEV SGLASRLVDG EPRSDPIAAE NVGSTAVAVV
201: VCSSHVVVAN CGDSRIVLSR GKEPVALSID QKPDRKDERA RIEAAGGKVI QWNGHRVSGI LAMSRSIGDR YLKPYIIPKP EVTVVPRAKD DDCLILASDG
301: LWDVVSNEEA CKVARRQIQQ WHKNNSVTTS SSDGGDGSTD PAAQAAADYL TRLALKKGSQ DNITVIVVDL KPRRKPKNNS
101: ALRLPSHLFA VFDGHGGAEV SNYCRERLHV VLSKELRRPP SDLGEMSDVD MKEHWDDLFT RCFQTVDDEV SGLASRLVDG EPRSDPIAAE NVGSTAVAVV
201: VCSSHVVVAN CGDSRIVLSR GKEPVALSID QKPDRKDERA RIEAAGGKVI QWNGHRVSGI LAMSRSIGDR YLKPYIIPKP EVTVVPRAKD DDCLILASDG
301: LWDVVSNEEA CKVARRQIQQ WHKNNSVTTS SSDGGDGSTD PAAQAAADYL TRLALKKGSQ DNITVIVVDL KPRRKPKNNS
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.