Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G348400.1 | Wheat | plastid | 97.58 | 98.06 |
| TraesCS3D01G342000.1 | Wheat | plastid | 96.62 | 97.09 |
| HORVU3Hr1G039010.1 | Barley | plastid | 94.2 | 94.66 |
| HORVU3Hr1G088100.1 | Barley | plastid | 94.2 | 94.66 |
| Zm00001d038436_P001 | Maize | plastid | 77.78 | 80.5 |
| TraesCS1B01G306800.1 | Wheat | mitochondrion | 74.4 | 79.38 |
| EES19683 | Sorghum | plastid | 80.19 | 76.85 |
| Zm00001d043014_P001 | Maize | cytosol | 69.08 | 67.14 |
| Bra028758.1-P | Field mustard | cytosol | 50.24 | 63.03 |
| KRH00319 | Soybean | cytosol | 52.17 | 61.02 |
| Os01t0827800-00 | Rice | plastid | 75.36 | 60.94 |
| TraesCS2B01G105300.1 | Wheat | plastid | 63.28 | 60.37 |
| TraesCS4B01G189800.1 | Wheat | cytosol | 64.73 | 59.82 |
| KRH49452 | Soybean | plastid | 51.21 | 59.55 |
| Solyc05g052420.1.1 | Tomato | cytosol | 23.19 | 58.54 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 43.96 | 57.59 |
| GSMUA_Achr5P29490_001 | Banana | plastid | 44.93 | 57.41 |
| KRH73249 | Soybean | plastid | 57.49 | 57.21 |
| CDY18391 | Canola | plastid | 55.56 | 56.37 |
| CDY54415 | Canola | cytosol | 55.56 | 56.37 |
| Bra017125.1-P | Field mustard | plastid | 55.56 | 56.37 |
| PGSC0003DMT400053102 | Potato | cytosol, plastid | 54.11 | 55.72 |
| Solyc03g095780.1.1 | Tomato | plastid | 54.11 | 55.72 |
| PGSC0003DMT400053119 | Potato | cytosol, plastid | 54.11 | 55.72 |
| PGSC0003DMT400053120 | Potato | cytosol, plastid | 54.11 | 55.72 |
| Solyc10g076410.1.1 | Tomato | plastid | 54.59 | 55.66 |
| VIT_13s0067g01940.t01 | Wine grape | plastid | 57.0 | 55.66 |
| CDY07739 | Canola | plastid | 55.56 | 55.56 |
| Bra000052.1-P | Field mustard | plastid | 55.56 | 55.56 |
| CDX93191 | Canola | cytosol | 54.11 | 55.17 |
| KRH76014 | Soybean | cytosol | 57.49 | 55.09 |
| CDY14471 | Canola | plastid | 55.07 | 55.07 |
| CDX91449 | Canola | plastid | 55.07 | 55.07 |
| Solyc10g085310.1.1 | Tomato | plastid | 56.52 | 54.93 |
| PGSC0003DMT400028658 | Potato | nucleus | 56.52 | 54.93 |
| CDY04951 | Canola | cytosol | 52.17 | 54.82 |
| Bra017012.1-P | Field mustard | cytosol | 54.11 | 54.63 |
| CDY52923 | Canola | cytosol | 54.11 | 54.63 |
| AT2G38310.1 | Thale cress | plastid | 54.59 | 54.59 |
| PGSC0003DMT400041080 | Potato | mitochondrion | 54.59 | 54.59 |
| Bra005115.1-P | Field mustard | plastid | 39.13 | 54.36 |
| CDY54453 | Canola | plastid | 54.59 | 54.33 |
| PGSC0003DMT400069734 | Potato | mitochondrion, plastid | 54.59 | 54.33 |
| PGSC0003DMT400061535 | Potato | plastid | 56.52 | 53.67 |
| KRH14908 | Soybean | plastid | 56.04 | 53.21 |
| CDX98844 | Canola | cytosol | 52.17 | 52.94 |
| Solyc09g015380.1.1 | Tomato | plastid | 51.21 | 52.74 |
| AT5G05440.1 | Thale cress | cytosol | 51.69 | 52.71 |
| Bra009113.1-P | Field mustard | cytosol | 51.69 | 52.45 |
| CDX70150 | Canola | cytosol | 51.69 | 52.45 |
| VIT_08s0058g00470.t01 | Wine grape | plastid | 57.0 | 51.98 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 53.14 | 51.89 |
| AT2G40330.1 | Thale cress | cytosol | 53.14 | 51.16 |
| Bra004967.1-P | Field mustard | mitochondrion | 52.17 | 50.94 |
| PGSC0003DMT400075056 | Potato | plastid | 52.66 | 50.93 |
| CDY72318 | Canola | cytosol | 49.76 | 50.74 |
| Bra005853.1-P | Field mustard | cytosol | 49.76 | 50.74 |
| CDY07608 | Canola | cytosol, mitochondrion | 51.69 | 50.47 |
| Bra000184.1-P | Field mustard | cytosol, mitochondrion | 51.69 | 50.47 |
| CDX80959 | Canola | cytosol | 49.28 | 50.25 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 51.21 | 50.0 |
| CDY24911 | Canola | cytosol, mitochondrion | 51.21 | 49.77 |
| OQU87775 | Sorghum | endoplasmic reticulum, extracellular | 65.22 | 49.63 |
| TraesCS7B01G269600.1 | Wheat | cytosol | 46.38 | 48.73 |
| TraesCS1B01G206600.1 | Wheat | cytosol, unclear | 46.86 | 45.54 |
| Zm00001d012475_P001 | Maize | cytosol | 68.12 | 45.19 |
| KRH31193 | Soybean | cytosol, golgi, plastid | 55.56 | 44.75 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 43.0 | 43.41 |
| Solyc06g050500.2.1 | Tomato | plastid | 57.49 | 43.27 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 33.82 | 35.9 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G380300.1 | EnsemblPlantsGene:TraesCS3B01G380300 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF28 | PFAM:PF10604 | SEG:seg | SUPFAM:SSF55961 | TIGR:cd07821 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:597816162..597816785
Molecular Weight (calculated)
22097.4 Da
IEP (calculated)
8.494
GRAVY (calculated)
0.032
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MPYAAARPSL QQHSRISSGC KALVAHGAAV PGEVALYHEH AAGAGQCCSA VVQAIAAPVE AVWSVVRRFD RPQAYKRFIK SCRVVDGDGG AVGSVREVRV
101: VSGLPGTSSR ERLEILDDER RVLSFRIVGG EHRLANYRSV TTVNEVASTV AAGAPRVTLV VESYVVDVPP GNTSDETRLF VDTIVRCNLQ SLARTAEQLA
201: LAVPHVN
101: VSGLPGTSSR ERLEILDDER RVLSFRIVGG EHRLANYRSV TTVNEVASTV AAGAPRVTLV VESYVVDVPP GNTSDETRLF VDTIVRCNLQ SLARTAEQLA
201: LAVPHVN
001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ
Arabidopsis Description
PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.