Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G249000.1 | Wheat | cytosol | 89.69 | 96.89 |
| TraesCS3D01G249000.1 | Wheat | cytosol | 88.01 | 96.83 |
| HORVU3Hr1G067380.4 | Barley | cytosol | 76.74 | 94.96 |
| TraesCS1B01G375100.1 | Wheat | cytosol | 59.95 | 65.62 |
| OQU87413 | Sorghum | cytosol | 59.23 | 64.49 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 11.75 | 54.44 |
| Solyc08g062640.2.1 | Tomato | cytosol | 17.27 | 53.73 |
| Bra016595.1-P | Field mustard | cytosol | 46.76 | 47.56 |
| CDX96761 | Canola | cytosol | 39.81 | 47.43 |
| CDX83901 | Canola | cytosol | 39.57 | 47.14 |
| TraesCS3B01G240000.1 | Wheat | peroxisome, plasma membrane, vacuole | 49.88 | 43.42 |
| TraesCS1B01G475700.1 | Wheat | cytosol | 46.04 | 43.15 |
| TraesCS5B01G182000.1 | Wheat | peroxisome | 32.61 | 38.97 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 43.65 | 38.32 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 46.52 | 38.19 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 43.88 | 37.81 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 43.88 | 37.81 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 49.16 | 37.41 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 49.4 | 37.39 |
| CDY26234 | Canola | cytosol | 44.36 | 37.3 |
| Bra025964.1-P | Field mustard | cytosol | 45.08 | 37.01 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 47.48 | 36.94 |
| CDY48313 | Canola | cytosol | 44.36 | 36.93 |
| PGSC0003DMT400006608 | Potato | plastid | 48.2 | 36.88 |
| AT1G17550.1 | Thale cress | cytosol | 44.6 | 36.4 |
| AT1G72770.1 | Thale cress | cytosol | 44.36 | 36.2 |
| KRH05300 | Soybean | cytosol | 48.2 | 36.02 |
| KRH52222 | Soybean | cytosol | 46.52 | 35.66 |
| KRH61549 | Soybean | cytosol | 46.52 | 35.66 |
| KRH15739 | Soybean | cytosol | 47.0 | 35.19 |
| TraesCS1B01G441400.1 | Wheat | cytosol | 31.65 | 34.38 |
| TraesCS3B01G266200.1 | Wheat | nucleus, peroxisome, plastid | 32.85 | 33.09 |
| TraesCS4B01G210100.1 | Wheat | nucleus | 30.94 | 31.77 |
| Solyc08g062650.2.1 | Tomato | extracellular | 35.25 | 31.34 |
| TraesCS3B01G394600.3 | Wheat | plastid | 31.89 | 31.07 |
| TraesCS2B01G023600.1 | Wheat | cytosol | 33.33 | 30.22 |
| TraesCS3B01G171100.1 | Wheat | peroxisome | 24.22 | 28.77 |
| TraesCS3B01G170900.1 | Wheat | peroxisome | 20.86 | 27.71 |
| TraesCS3B01G171000.1 | Wheat | cytosol, nucleus, peroxisome | 19.18 | 24.92 |
| TraesCS7B01G297000.2 | Wheat | plasma membrane | 22.06 | 8.62 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | InterPro:IPR001932 | InterPro:IPR036457 |
| PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF517 | SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS3B01G277900 |
| EnsemblPlants:TraesCS3B01G277900.1 | TIGR:cd00143 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3B:-:447981206..447984037
Molecular Weight (calculated)
44411.9 Da
IEP (calculated)
7.002
GRAVY (calculated)
-0.217
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAVFAGEG AAARGGCSAE CAGGIERPPD LGSRARAAGD GCGKRSVYLM ECVPLWGCAA ARGRAAEMED ACAAVPRFAA VPARMLASSR ELDGIGGDFD
101: AAELRLPAHL FGVYDGHGGS EVRLSSSPVT PGPDETHQAS RPSRSCFIMP VQVANYCRDK IHVVLREVLK AGRWLEELGE VGELDVKEPW EKVFGDCFQK
201: VDDEVSGKAS RFSNGTREIR PEPIAADNVG STAVVAIVCS SHVITANCGD SRVVLCRGKE PIALSVDHKP DRKDERARIE AAGGKVIDWN GYRVSGILAM
301: SRSIGDRYLK PFLIPKPEVS IVARAKDDDC LILASDGLWD VMSNEDACKV ARRQILLWYK NNNDGANSDG GSEPTMNPAA KAAADCLVRL ALSKGSGDNI
401: SVIVIDLKSR KKTKGKT
101: AAELRLPAHL FGVYDGHGGS EVRLSSSPVT PGPDETHQAS RPSRSCFIMP VQVANYCRDK IHVVLREVLK AGRWLEELGE VGELDVKEPW EKVFGDCFQK
201: VDDEVSGKAS RFSNGTREIR PEPIAADNVG STAVVAIVCS SHVITANCGD SRVVLCRGKE PIALSVDHKP DRKDERARIE AAGGKVIDWN GYRVSGILAM
301: SRSIGDRYLK PFLIPKPEVS IVARAKDDDC LILASDGLWD VMSNEDACKV ARRQILLWYK NNNDGANSDG GSEPTMNPAA KAAADCLVRL ALSKGSGDNI
401: SVIVIDLKSR KKTKGKT
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.