Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G249000.1 | Wheat | cytosol | 97.1 | 95.34 |
| HORVU3Hr1G067380.4 | Barley | cytosol | 84.43 | 94.96 |
| TraesCS3B01G277900.1 | Wheat | cytosol | 96.83 | 88.01 |
| TraesCS1D01G363500.1 | Wheat | cytosol | 67.02 | 66.49 |
| OQU87413 | Sorghum | cytosol | 65.7 | 65.01 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 12.66 | 53.33 |
| Solyc08g062640.2.1 | Tomato | cytosol | 18.73 | 52.99 |
| CDX96761 | Canola | cytosol | 43.27 | 46.86 |
| TraesCS1D01G449700.1 | Wheat | cytosol | 50.66 | 46.83 |
| Bra016595.1-P | Field mustard | cytosol | 50.4 | 46.59 |
| CDX83901 | Canola | cytosol | 42.48 | 46.0 |
| TraesCS3D01G212100.1 | Wheat | peroxisome, plasma membrane, vacuole | 54.88 | 43.7 |
| TraesCS5D01G188600.1 | Wheat | peroxisome | 35.88 | 38.97 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 47.76 | 38.11 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 50.66 | 37.8 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 48.02 | 37.6 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 48.02 | 37.6 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 53.3 | 36.86 |
| CDY26234 | Canola | cytosol | 48.02 | 36.69 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 53.3 | 36.66 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 51.72 | 36.57 |
| PGSC0003DMT400006608 | Potato | plastid | 52.24 | 36.33 |
| CDY48313 | Canola | cytosol | 48.02 | 36.33 |
| Bra025964.1-P | Field mustard | cytosol | 48.55 | 36.22 |
| AT1G17550.1 | Thale cress | cytosol | 48.55 | 36.01 |
| AT1G72770.1 | Thale cress | cytosol | 48.55 | 36.01 |
| KRH52222 | Soybean | cytosol | 51.19 | 35.66 |
| KRH05300 | Soybean | cytosol | 52.24 | 35.48 |
| KRH61549 | Soybean | cytosol | 50.92 | 35.48 |
| TraesCS1D01G419000.1 | Wheat | nucleus | 35.09 | 35.28 |
| KRH15739 | Soybean | cytosol | 51.19 | 34.83 |
| TraesCS7D01G042600.1 | Wheat | cytosol | 31.4 | 34.69 |
| TraesCS3D01G238000.1 | Wheat | cytosol, nucleus, plastid | 36.41 | 34.5 |
| TraesCS3D01G355900.1 | Wheat | plastid | 35.09 | 33.5 |
| TraesCS7D01G042300.1 | Wheat | cytosol | 32.19 | 32.97 |
| TraesCS4D01G210900.1 | Wheat | nucleus | 34.3 | 31.71 |
| Solyc08g062650.2.1 | Tomato | extracellular | 38.26 | 30.92 |
| TraesCS2D01G000300.1 | Wheat | cytosol | 36.94 | 30.84 |
| TraesCS3D01G153200.1 | Wheat | nucleus, peroxisome, plastid | 26.12 | 28.21 |
| TraesCS3D01G153000.1 | Wheat | peroxisome | 21.64 | 26.8 |
| TraesCS7D01G390600.1 | Wheat | plasma membrane | 24.27 | 8.62 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | InterPro:IPR001932 |
| InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF517 | SMART:SM00332 | SUPFAM:SSF81606 |
| EnsemblPlantsGene:TraesCS3D01G249000 | EnsemblPlants:TraesCS3D01G249000.1 | TIGR:cd00143 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3D:-:348158500..348161083
Molecular Weight (calculated)
40111.8 Da
IEP (calculated)
7.244
GRAVY (calculated)
-0.188
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATVFAGEG AAARGGCSAE CAGGIERPPD LGSRARAAGD GCAKRSVYLM ECVPLWGCAA ARGRAAEMED ACAAVPRFAA LPARMLASSR ELDGIGGDFD
101: ASELRLPAHL FGVYDGHGGS EVANYCRDKI HVVLREVLRA GRGLGELGEV DVKEPWEKVF GDCFQKVDDE VSGKASRLSN GRPEPIAADN VGSTAVVAIV
201: CSSHVITANC GDSRVVLCRG KEPIALSVDH KPDRKDERAR IEAAGGKVID WNGYRVSGIL AMSRSIGDRY LKPFLIPKPE VSIVARAKDD DCLILASDGL
301: WDVMSNEDAC KVARRQILLW YKNNNDGANS DGGSEPTMNP AAKAAADCLV RLALSKGSGD NISVIVIDLK SRKKPKGKS
101: ASELRLPAHL FGVYDGHGGS EVANYCRDKI HVVLREVLRA GRGLGELGEV DVKEPWEKVF GDCFQKVDDE VSGKASRLSN GRPEPIAADN VGSTAVVAIV
201: CSSHVITANC GDSRVVLCRG KEPIALSVDH KPDRKDERAR IEAAGGKVID WNGYRVSGIL AMSRSIGDRY LKPFLIPKPE VSIVARAKDD DCLILASDGL
301: WDVMSNEDAC KVARRQILLW YKNNNDGANS DGGSEPTMNP AAKAAADCLV RLALSKGSGD NISVIVIDLK SRKKPKGKS
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.