Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G154400.1 | Wheat | cytosol | 96.02 | 97.97 |
| Zm00001d016294_P001 | Maize | cytosol | 80.6 | 86.17 |
| EES06532 | Sorghum | cytosol | 81.09 | 79.9 |
| TraesCS7D01G364600.1 | Wheat | cytosol | 76.12 | 77.67 |
| GSMUA_Achr7P09320_001 | Banana | cytosol | 68.16 | 73.66 |
| Os02t0226801-00 | Rice | cytosol | 75.12 | 71.9 |
| GSMUA_Achr6P00980_001 | Banana | cytosol | 67.16 | 69.23 |
| GSMUA_Achr10P... | Banana | cytosol | 66.17 | 67.51 |
| Solyc08g065410.1.1 | Tomato | cytosol | 48.26 | 66.44 |
| VIT_04s0008g00890.t01 | Wine grape | cytosol | 59.2 | 64.32 |
| Bra007772.1-P | Field mustard | cytosol | 58.71 | 62.77 |
| CDY11503 | Canola | cytosol | 58.71 | 62.77 |
| CDX76731 | Canola | cytosol | 58.21 | 62.23 |
| PGSC0003DMT400075340 | Potato | cytosol | 58.21 | 61.58 |
| Solyc12g095970.1.1 | Tomato | cytosol | 57.71 | 61.05 |
| AT2G26040.1 | Thale cress | cytosol | 57.21 | 60.53 |
| KRH52194 | Soybean | cytosol | 56.22 | 60.43 |
| KRH61500 | Soybean | cytosol | 56.72 | 60.32 |
| KRH05492 | Soybean | cytosol | 56.22 | 60.11 |
| PGSC0003DMT400077008 | Potato | cytosol | 55.72 | 59.57 |
| KRH15519 | Soybean | cytosol | 57.21 | 54.76 |
| CDY48030 | Canola | plastid | 54.73 | 53.66 |
| CDY22516 | Canola | plastid | 54.23 | 53.17 |
| Bra008064.1-P | Field mustard | plastid | 53.73 | 52.68 |
| CDX82120 | Canola | plastid | 53.73 | 52.68 |
| AT1G73000.1 | Thale cress | cytosol, plastid | 54.23 | 52.15 |
| TraesCS1D01G293600.1 | Wheat | mitochondrion, plastid | 49.75 | 49.75 |
| TraesCS1D01G195300.1 | Wheat | cytosol | 52.24 | 49.3 |
| TraesCS2D01G087500.1 | Wheat | plastid | 52.24 | 49.07 |
| TraesCS3D01G342000.1 | Wheat | plastid | 49.25 | 48.06 |
| TraesCS4D01G191200.1 | Wheat | cytosol | 52.24 | 46.88 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 39.3 | 38.54 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 33.33 | 34.01 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G161500.1 | EnsemblPlantsGene:TraesCS3D01G161500 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF22 | PFAM:PF10604 | SEG:seg | SUPFAM:SSF55961 | TIGR:cd07821 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:132274871..132275794
Molecular Weight (calculated)
21916.6 Da
IEP (calculated)
4.826
GRAVY (calculated)
-0.339
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPHMESALR QGLTEPERRE VEGVVEEHHT FPGRASGTCT SLVTQRVQAP LAAVWDIVRG FANPQRYKHF IKSCALAAGD GATVGSVREV TVVSGLPAST
101: STERLEILDD DRHILSFRVV GGEHRLRNYR SVTSVTEFAD EPSGPSYCVV VESYVVDVPE GNTEEDTRMF TDTVVKLNLQ KLAAIATTTT SSSPPPSDEQ
201: S
101: STERLEILDD DRHILSFRVV GGEHRLRNYR SVTSVTEFAD EPSGPSYCVV VESYVVDVPE GNTEEDTRMF TDTVVKLNLQ KLAAIATTTT SSSPPPSDEQ
201: S
001: MSSSPAVKGL TDEEQKTLEP VIKTYHQFEP DPTTCTSLIT QRIHAPASVV WPLIRRFDNP ERYKHFVKRC RLISGDGDVG SVREVTVISG LPASTSTERL
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE
Arabidopsis Description
PYL2Abscisic acid receptor PYL2 [Source:UniProtKB/Swiss-Prot;Acc:O80992]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.