Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G443400.1 | Wheat | mitochondrion | 62.16 | 18.8 |
| TraesCS4A01G443500.1 | Wheat | mitochondrion | 62.16 | 18.8 |
| TraesCS7A01G048200.1 | Wheat | plastid | 58.56 | 17.76 |
| TraesCS2A01G000400.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 53.15 | 13.56 |
| Os05t0537400-00 | Rice | cytosol | 36.04 | 13.51 |
| Zm00001d011131_P001 | Maize | cytosol | 34.23 | 13.48 |
| TraesCS5A01G183600.1 | Wheat | peroxisome | 36.94 | 11.75 |
| TraesCS1A01G411200.1 | Wheat | nucleus | 38.74 | 11.26 |
| TraesCS4A01G094300.1 | Wheat | nucleus | 39.64 | 10.76 |
| TraesCS3A01G237800.1 | Wheat | plastid | 36.04 | 10.15 |
| TraesCS1A01G441200.1 | Wheat | cytosol | 36.94 | 9.95 |
| TraesCS3A01G249000.1 | Wheat | cytosol | 34.23 | 9.84 |
| Bra016595.1-P | Field mustard | cytosol | 36.04 | 9.76 |
| TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 34.23 | 9.72 |
| TraesCS1A01G358600.1 | Wheat | cytosol | 32.43 | 9.47 |
| TraesCS3A01G209200.1 | Wheat | peroxisome, plasma membrane, vacuole | 39.64 | 9.19 |
| TraesCS3A01G144400.1 | Wheat | peroxisome | 24.32 | 8.82 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 36.94 | 8.63 |
| CDX96761 | Canola | cytosol | 27.03 | 8.57 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 36.94 | 8.47 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 36.94 | 8.47 |
| CDX83901 | Canola | cytosol | 26.13 | 8.29 |
| AT1G72770.1 | Thale cress | cytosol | 37.84 | 8.22 |
| Solyc08g062650.2.1 | Tomato | extracellular | 34.23 | 8.1 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 36.94 | 8.07 |
| CDY26234 | Canola | cytosol | 35.14 | 7.86 |
| CDY48313 | Canola | cytosol | 35.14 | 7.78 |
| Bra025964.1-P | Field mustard | cytosol | 35.14 | 7.68 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 36.94 | 7.65 |
| AT1G17550.1 | Thale cress | cytosol | 35.14 | 7.63 |
| KRH52222 | Soybean | cytosol | 36.94 | 7.54 |
| KRH61549 | Soybean | cytosol | 36.94 | 7.54 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 36.94 | 7.48 |
| KRH05300 | Soybean | cytosol | 36.94 | 7.35 |
| PGSC0003DMT400006608 | Potato | plastid | 36.04 | 7.34 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 36.04 | 7.26 |
| KRH15739 | Soybean | cytosol | 36.04 | 7.18 |
| Solyc08g062640.2.1 | Tomato | cytosol | 4.5 | 3.73 |
| TraesCS7A01G395000.1 | Wheat | plasma membrane, vacuole | 25.23 | 2.62 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 0.9 | 1.11 |
| HORVU3Hr1G067360.1 | Barley | cytosol, peroxisome | 0.0 | 0.0 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF537 | SUPFAM:SSF81606 |
| EnsemblPlantsGene:TraesCS7A01G047900 | EnsemblPlants:TraesCS7A01G047900.1 | TIGR:cd00143 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:21882714..21883187
Molecular Weight (calculated)
11991.4 Da
IEP (calculated)
4.425
GRAVY (calculated)
0.189
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MHFFAFMDGH GGLKLSALCR EQMHTILVEE LAGPENDEEA ECHAWEVVLN RGFERADALG IGLSELGWPI VGCTAVVALL HRGSILVINC GDSRAMLCSA
101: GDAIPLSEDQ R
101: GDAIPLSEDQ R
001: MEEVSPAIAG PFRPFSETQM DFTGIRLGKG YCNNQYSNQD SENGDLMVSL PETSSCSVSG SHGSESRKVL ISRINSPNLN MKESAAADIV VVDISAGDEI
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN
Arabidopsis Description
ABI1Protein phosphatase 2C 56 [Source:UniProtKB/Swiss-Prot;Acc:P49597]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.