Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G161500.1 | Wheat | cytosol, nucleus, plastid | 97.97 | 96.02 |
| Zm00001d016294_P001 | Maize | cytosol | 81.22 | 85.11 |
| EES06532 | Sorghum | cytosol | 81.22 | 78.43 |
| TraesCS7A01G358200.1 | Wheat | cytosol | 75.63 | 76.02 |
| Os02t0226801-00 | Rice | cytosol | 77.67 | 72.86 |
| GSMUA_Achr7P09320_001 | Banana | cytosol | 68.02 | 72.04 |
| GSMUA_Achr6P00980_001 | Banana | cytosol | 67.51 | 68.21 |
| Solyc08g065410.1.1 | Tomato | cytosol | 49.24 | 66.44 |
| GSMUA_Achr10P... | Banana | cytosol | 65.99 | 65.99 |
| VIT_04s0008g00890.t01 | Wine grape | cytosol | 59.9 | 63.78 |
| CDY11503 | Canola | cytosol | 59.39 | 62.23 |
| Bra007772.1-P | Field mustard | cytosol | 59.39 | 62.23 |
| CDX76731 | Canola | cytosol | 58.88 | 61.7 |
| PGSC0003DMT400075340 | Potato | cytosol | 59.39 | 61.58 |
| Solyc12g095970.1.1 | Tomato | cytosol | 58.88 | 61.05 |
| KRH05492 | Soybean | cytosol | 57.36 | 60.11 |
| AT2G26040.1 | Thale cress | cytosol | 57.87 | 60.0 |
| KRH52194 | Soybean | cytosol | 56.85 | 59.89 |
| PGSC0003DMT400077008 | Potato | cytosol | 56.85 | 59.57 |
| KRH61500 | Soybean | cytosol | 56.85 | 59.26 |
| TraesCS4A01G114400.1 | Wheat | cytosol | 51.27 | 56.42 |
| KRH15519 | Soybean | cytosol | 58.38 | 54.76 |
| CDY48030 | Canola | plastid | 54.82 | 52.68 |
| CDY22516 | Canola | plastid | 54.31 | 52.2 |
| AT1G73000.1 | Thale cress | cytosol, plastid | 55.33 | 52.15 |
| CDX82120 | Canola | plastid | 53.81 | 51.71 |
| Bra008064.1-P | Field mustard | plastid | 53.81 | 51.71 |
| TraesCS1A01G297600.1 | Wheat | mitochondrion | 50.25 | 49.25 |
| TraesCS1A01G191700.1 | Wheat | cytosol | 51.78 | 48.34 |
| TraesCS3A01G348400.1 | Wheat | plastid | 48.22 | 46.12 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 40.1 | 38.54 |
| TraesCS2A01G089400.1 | Wheat | plastid | 52.28 | 36.01 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 33.5 | 33.5 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G154400.1 | EnsemblPlantsGene:TraesCS3A01G154400 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF22 | PFAM:PF10604 | SEG:seg | SUPFAM:SSF55961 | TIGR:cd07821 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:145667247..145667840
Molecular Weight (calculated)
21447.1 Da
IEP (calculated)
4.923
GRAVY (calculated)
-0.330
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MESALRQGLT EPERREVEGV VEEHHTFPGR ASGTCTSLVT QRVQAPLAAV WDIVRGFANP QRYKHFIKSC ALAAGDGATV GSVREVTVVS GLPASTSTER
101: LEILDDDRHI LSFRVVGGEH RLRNYRSVTS VTEFTDQPSG PPYCVVVESY VVDVPEGNTE EDTRMFTDTV VKLNLQKLAA IATTTSSSSP PPSDEQS
101: LEILDDDRHI LSFRVVGGEH RLRNYRSVTS VTEFTDQPSG PPYCVVVESY VVDVPEGNTE EDTRMFTDTV VKLNLQKLAA IATTTSSSSP PPSDEQS
001: MSSSPAVKGL TDEEQKTLEP VIKTYHQFEP DPTTCTSLIT QRIHAPASVV WPLIRRFDNP ERYKHFVKRC RLISGDGDVG SVREVTVISG LPASTSTERL
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE
Arabidopsis Description
PYL2Abscisic acid receptor PYL2 [Source:UniProtKB/Swiss-Prot;Acc:O80992]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.