Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d016294_P001 | Maize | cytosol | 83.82 | 90.96 |
TraesCS3A01G154400.1 | Wheat | cytosol | 78.43 | 81.22 |
TraesCS3D01G161500.1 | Wheat | cytosol, nucleus, plastid | 79.9 | 81.09 |
GSMUA_Achr7P09320_001 | Banana | cytosol | 69.61 | 76.34 |
Os02t0226801-00 | Rice | cytosol | 77.45 | 75.24 |
EER88529 | Sorghum | cytosol | 74.02 | 74.02 |
GSMUA_Achr6P00980_001 | Banana | cytosol | 69.61 | 72.82 |
GSMUA_Achr10P... | Banana | cytosol | 67.65 | 70.05 |
Solyc08g065410.1.1 | Tomato | cytosol | 47.55 | 66.44 |
CDY11503 | Canola | cytosol | 59.8 | 64.89 |
Bra007772.1-P | Field mustard | cytosol | 59.8 | 64.89 |
VIT_04s0008g00890.t01 | Wine grape | cytosol | 58.82 | 64.86 |
CDX76731 | Canola | cytosol | 59.31 | 64.36 |
PGSC0003DMT400075340 | Potato | cytosol | 59.8 | 64.21 |
AT2G26040.1 | Thale cress | cytosol | 58.82 | 63.16 |
Solyc12g095970.1.1 | Tomato | cytosol | 58.82 | 63.16 |
KRH52194 | Soybean | cytosol | 56.37 | 61.5 |
KRH61500 | Soybean | cytosol | 56.86 | 61.38 |
PGSC0003DMT400077008 | Potato | cytosol | 56.37 | 61.17 |
KRH05492 | Soybean | cytosol | 55.88 | 60.64 |
KRH15519 | Soybean | cytosol | 55.88 | 54.29 |
CDY48030 | Canola | plastid | 53.43 | 53.17 |
CDX82120 | Canola | plastid | 53.43 | 53.17 |
CDY22516 | Canola | plastid | 52.94 | 52.68 |
Bra008064.1-P | Field mustard | plastid | 52.45 | 52.2 |
AT1G73000.1 | Thale cress | cytosol, plastid | 53.43 | 52.15 |
OQU92088 | Sorghum | cytosol | 48.53 | 46.7 |
EES19683 | Sorghum | plastid | 48.53 | 45.83 |
EER92405 | Sorghum | plastid | 49.02 | 45.05 |
EES17886 | Sorghum | cytosol | 38.24 | 39.59 |
EES04864 | Sorghum | cytosol | 36.76 | 35.55 |
OQU87775 | Sorghum | endoplasmic reticulum, extracellular | 45.1 | 33.82 |
Protein Annotations
EnsemblPlants:EES06532 | EnsemblPlantsGene:SORBI_3004G097800 | EntrezGene:8073793 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase |
InterPro:START-like_dom_sf | PANTHER:PTHR31213 | PANTHER:PTHR31213:SF22 | PFAM:PF10604 | ProteinID:EES06532 | ProteinID:EES06532.1 |
RefSeq:XP_002453556.1 | SEG:seg | SUPFAM:SSF55961 | UniParc:UPI0001A85D45 | UniProt:C5XYH3 | MapMan:11.1.2.1.1.1 |
Description
hypothetical protein
Coordinates
chr4:-:8708105..8709389
Molecular Weight (calculated)
22248.2 Da
IEP (calculated)
6.857
GRAVY (calculated)
-0.284
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPHMETALR QGGLSELEQR ELEPVVRAHH TFPGRSPGTT CTSLVTQRVD APLSAVWPIV RGFAAPQRYK HFIKSCDLRS GDGATVGSVR EVTVVSGLPA
101: STSTERLEIL DDDRHILSFR VVGGDHRLRN YRSVTSVTEF HHHHQAAAGR PYCVVVESYV VDVPEGNTEE DTRMFTDTVV KLNLQKLAAI ATSSAAAAAS
201: NSST
101: STSTERLEIL DDDRHILSFR VVGGDHRLRN YRSVTSVTEF HHHHQAAAGR PYCVVVESYV VDVPEGNTEE DTRMFTDTVV KLNLQKLAAI ATSSAAAAAS
201: NSST
001: MSSSPAVKGL TDEEQKTLEP VIKTYHQFEP DPTTCTSLIT QRIHAPASVV WPLIRRFDNP ERYKHFVKRC RLISGDGDVG SVREVTVISG LPASTSTERL
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE
Arabidopsis Description
PYL2Abscisic acid receptor PYL2 [Source:UniProtKB/Swiss-Prot;Acc:O80992]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.