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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • plastid 1
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016294_P001 Maize cytosol 83.82 90.96
TraesCS3A01G154400.1 Wheat cytosol 78.43 81.22
TraesCS3D01G161500.1 Wheat cytosol, nucleus, plastid 79.9 81.09
GSMUA_Achr7P09320_001 Banana cytosol 69.61 76.34
Os02t0226801-00 Rice cytosol 77.45 75.24
EER88529 Sorghum cytosol 74.02 74.02
GSMUA_Achr6P00980_001 Banana cytosol 69.61 72.82
GSMUA_Achr10P... Banana cytosol 67.65 70.05
Solyc08g065410.1.1 Tomato cytosol 47.55 66.44
CDY11503 Canola cytosol 59.8 64.89
Bra007772.1-P Field mustard cytosol 59.8 64.89
VIT_04s0008g00890.t01 Wine grape cytosol 58.82 64.86
CDX76731 Canola cytosol 59.31 64.36
PGSC0003DMT400075340 Potato cytosol 59.8 64.21
AT2G26040.1 Thale cress cytosol 58.82 63.16
Solyc12g095970.1.1 Tomato cytosol 58.82 63.16
KRH52194 Soybean cytosol 56.37 61.5
KRH61500 Soybean cytosol 56.86 61.38
PGSC0003DMT400077008 Potato cytosol 56.37 61.17
KRH05492 Soybean cytosol 55.88 60.64
KRH15519 Soybean cytosol 55.88 54.29
CDY48030 Canola plastid 53.43 53.17
CDX82120 Canola plastid 53.43 53.17
CDY22516 Canola plastid 52.94 52.68
Bra008064.1-P Field mustard plastid 52.45 52.2
AT1G73000.1 Thale cress cytosol, plastid 53.43 52.15
OQU92088 Sorghum cytosol 48.53 46.7
EES19683 Sorghum plastid 48.53 45.83
EER92405 Sorghum plastid 49.02 45.05
EES17886 Sorghum cytosol 38.24 39.59
EES04864 Sorghum cytosol 36.76 35.55
OQU87775 Sorghum endoplasmic reticulum, extracellular 45.1 33.82
Protein Annotations
EnsemblPlants:EES06532EnsemblPlantsGene:SORBI_3004G097800EntrezGene:8073793Gene3D:3.30.530.20InterPro:IPR023393InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sfPANTHER:PTHR31213PANTHER:PTHR31213:SF22PFAM:PF10604ProteinID:EES06532ProteinID:EES06532.1
RefSeq:XP_002453556.1SEG:segSUPFAM:SSF55961UniParc:UPI0001A85D45UniProt:C5XYH3MapMan:11.1.2.1.1.1
Description
hypothetical protein
Coordinates
chr4:-:8708105..8709389
Molecular Weight (calculated)
22248.2 Da
IEP (calculated)
6.857
GRAVY (calculated)
-0.284
Length
204 amino acids
Sequence
(BLAST)
001: MEPHMETALR QGGLSELEQR ELEPVVRAHH TFPGRSPGTT CTSLVTQRVD APLSAVWPIV RGFAAPQRYK HFIKSCDLRS GDGATVGSVR EVTVVSGLPA
101: STSTERLEIL DDDRHILSFR VVGGDHRLRN YRSVTSVTEF HHHHQAAAGR PYCVVVESYV VDVPEGNTEE DTRMFTDTVV KLNLQKLAAI ATSSAAAAAS
201: NSST
Best Arabidopsis Sequence Match ( AT2G26040.1 )
(BLAST)
001: MSSSPAVKGL TDEEQKTLEP VIKTYHQFEP DPTTCTSLIT QRIHAPASVV WPLIRRFDNP ERYKHFVKRC RLISGDGDVG SVREVTVISG LPASTSTERL
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE
Arabidopsis Description
PYL2Abscisic acid receptor PYL2 [Source:UniProtKB/Swiss-Prot;Acc:O80992]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.