Factsheet for Bra008064.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002038.1-P
Bra016034.1-P
Bra034845.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73000.1	Bra016034.1-P	AT1G72770.1	19407142
AT1G73000.1	Bra002038.1-P	AT3G11410.1	19407142
AT1G73000.1	Bra034845.1-P	AT3G11410.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48030	Canola	plastid	99.02	99.02
CDY22516	Canola	plastid	98.54	98.54
AT1G73000.1	Thale cress	cytosol, plastid	87.32	85.65
GSMUA_Achr7P09320_001	Banana	cytosol	55.12	60.75
GSMUA_Achr6P00980_001	Banana	cytosol	55.61	58.46
Bra007772.1-P	Field mustard	cytosol	52.68	57.45
GSMUA_Achr10P...	Banana	cytosol	54.63	56.85
Zm00001d016294_P001	Maize	cytosol	51.71	56.38
TraesCS7B01G269600.1	Wheat	cytosol	51.71	53.81
TraesCS3A01G154400.1	Wheat	cytosol	51.71	53.81
TraesCS3D01G161500.1	Wheat	cytosol, nucleus, plastid	52.68	53.73
HORVU7Hr1G088140.2	Barley	cytosol	51.22	53.57
TraesCS7D01G364600.1	Wheat	cytosol	51.22	53.3
TraesCS7A01G358200.1	Wheat	cytosol	50.73	53.06
EES06532	Sorghum	cytosol	52.2	52.45
EER88529	Sorghum	cytosol	51.22	51.47
Os06t0562200-01	Rice	cytosol	50.73	50.24
Os02t0226801-00	Rice	cytosol	50.73	49.52
HORVU4Hr1G060110.1	Barley	mitochondrion	23.41	48.98
HORVU4Hr1G060100.1	Barley	mitochondrion	23.41	48.98
Bra013262.1-P	Field mustard	cytosol	44.88	48.17
Bra028758.1-P	Field mustard	cytosol	38.54	47.88
Bra012635.1-P	Field mustard	cytosol	44.39	47.64
HORVU3Hr1G030210.5	Barley	plastid	26.83	47.41
Bra021032.1-P	Field mustard	cytosol	35.61	46.5
Bra024995.1-P	Field mustard	nucleus	45.37	44.29
HORVU3Hr1G040680.1	Barley	plastid	24.39	43.48
Bra017526.1-P	Field mustard	nucleus	38.54	43.17
Bra005853.1-P	Field mustard	cytosol	40.49	40.89
Bra009113.1-P	Field mustard	cytosol	40.49	40.69
Bra005115.1-P	Field mustard	plastid	29.27	40.27
Bra029093.1-P	Field mustard	cytosol	36.1	40.22
Bra017125.1-P	Field mustard	plastid	40.0	40.2
Bra000052.1-P	Field mustard	plastid	39.51	39.13
Bra003077.1-P	Field mustard	cytosol	34.15	38.04
Bra000184.1-P	Field mustard	cytosol, mitochondrion	39.02	37.74
Bra025048.1-P	Field mustard	cytosol	31.22	37.65
Bra017012.1-P	Field mustard	cytosol	37.56	37.56
Bra004967.1-P	Field mustard	mitochondrion	38.54	37.26
Bra013334.1-P	Field mustard	cytosol	29.76	36.75
Bra022634.1-P	Field mustard	cytosol	33.66	36.7
Bra026299.1-P	Field mustard	cytosol	32.68	36.41
Bra003463.1-P	Field mustard	cytosol	32.68	35.83
Bra000938.1-P	Field mustard	cytosol	33.66	35.75
Bra033267.1-P	Field mustard	cytosol	32.2	35.48
HORVU3Hr1G107030.1	Barley	mitochondrion	28.78	20.42

Protein Annotations

MapMan:11.1.2.1.1.1	Gene3D:3.30.530.20	EnsemblPlantsGene:Bra008064	EnsemblPlants:Bra008064.1	EnsemblPlants:Bra008064.1-P	GO:GO:0003674
GO:GO:0004864	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009719	GO:GO:0009738	GO:GO:0009987
GO:GO:0010427	GO:GO:0019538	GO:GO:0030234	GO:GO:0032515	GO:GO:0042802	GO:GO:0042803
GO:GO:0043086	InterPro:IPR023393	UniProt:M4CV19	PFAM:PF10604	PANTHER:PTHR31213	PANTHER:PTHR31213:SF7
InterPro:Polyketide_cyclase/dehydratase	SUPFAM:SSF55961	InterPro:START-like_dom_sf	UniParc:UPI00025471D0	SEG:seg	:

Description

AT1G73000 (E=3e-092) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: Bet v I allergen family protein (TAIR:AT2G26040.1); Has 178 Blast hits to 178 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 178; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Coordinates

chrA02:+:12969759..12970376

Molecular Weight (calculated)

22929.4 Da

IEP (calculated)

9.100

GRAVY (calculated)

-0.247

Length

205 amino acids

Sequence
(BLAST)

001: MNPNLPLSHA PSSSSSTTIT PYALTKDEFS TLDPIIRTHH TLPRSPNTCT SLIAHRVDTP ARTIWRFVRD FANPNKYKHF IKSCTIRGNG KEISVGTIRE
101: VSVVSGLPAS TSIEILEALD EEKRILSFRV LGGEHRLRNY RSVTSVNEFV VLENDKVKRV YSVVLESYIV DIPKGNTEED TRMFVDTVVK SNLQNLAVVS
201: MATPT

Best Arabidopsis Sequence Match ( AT1G73000.1 )
(BLAST)

001: MNLAPIHDPS SSSTTTTSSS TPYGLTKDEF STLDSIIRTH HTFPRSPNTC TSLIAHRVDA PAHAIWRFVR DFANPNKYKH FIKSCTIRVN GNGIKEIKVG
101: TIREVSVVSG LPASTSVEIL EVLDEEKRIL SFRVLGGEHR LNNYRSVTSV NEFVVLEKDK KKRVYSVVLE SYIVDIPQGN TEEDTRMFVD TVVKSNLQNL
201: AVISTASPT

Arabidopsis Description

PYL3RCAR13 [Source:UniProtKB/TrEMBL;Acc:A0A178W862]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.