Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
- cytosol 1
- plasma membrane 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73000.1 | HORVU1Hr1G080290.6 | AT1G72770.1 | 19407142 |
| AT1G73000.1 | HORVU1Hr1G094840.9 | AT1G72770.1 | 19407142 |
| AT1G73000.1 | HORVU3Hr1G050340.1 | AT1G72770.1 | 19407142 |
| AT1G73000.1 | HORVU3Hr1G067360.1 | AT1G72770.1 | 19407142 |
| AT1G73000.1 | HORVU3Hr1G067380.4 | AT1G72770.1 | 19407142 |
| AT1G73000.1 | HORVU7Hr1G029040.1 | AT1G72770.1 | 19407142 |
| AT1G73000.1 | HORVU3Hr1G085930.3 | AT3G11410.1 | 19407142 |
| AT1G73000.1 | HORVU4Hr1G060370.1 | AT3G11410.1 | 19407142 |
| AT2G26040.1 | HORVU1Hr1G080290.6 | AT1G72770.1 | 19407142 |
| AT2G26040.1 | HORVU1Hr1G094840.9 | AT1G72770.1 | 19407142 |
| AT2G26040.1 | HORVU3Hr1G050340.1 | AT1G72770.1 | 19407142 |
| AT2G26040.1 | HORVU3Hr1G067360.1 | AT1G72770.1 | 19407142 |
| AT2G26040.1 | HORVU3Hr1G067380.4 | AT1G72770.1 | 19407142 |
| AT2G26040.1 | HORVU7Hr1G029040.1 | AT1G72770.1 | 19407142 |
| AT2G26040.1 | HORVU3Hr1G085930.3 | AT3G11410.1 | 19407142 |
| AT2G26040.1 | HORVU4Hr1G060370.1 | AT3G11410.1 | 19407142 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G040680.1 | Barley | plastid | 90.52 | 91.3 |
| HORVU4Hr1G060110.1 | Barley | mitochondrion | 70.69 | 83.67 |
| HORVU4Hr1G060100.1 | Barley | mitochondrion | 68.97 | 81.63 |
| HORVU7Hr1G088140.2 | Barley | cytosol | 74.14 | 43.88 |
| TraesCS7B01G269600.1 | Wheat | cytosol | 74.14 | 43.65 |
| TraesCS7A01G358200.1 | Wheat | cytosol | 73.28 | 43.37 |
| TraesCS7D01G364600.1 | Wheat | cytosol | 73.28 | 43.15 |
| Solyc08g065410.1.1 | Tomato | cytosol | 50.0 | 39.73 |
| EER88529 | Sorghum | cytosol | 68.97 | 39.22 |
| Os06t0562200-01 | Rice | cytosol | 68.97 | 38.65 |
| GSMUA_Achr7P09320_001 | Banana | cytosol | 57.76 | 36.02 |
| GSMUA_Achr10P... | Banana | cytosol | 59.48 | 35.03 |
| GSMUA_Achr6P00980_001 | Banana | cytosol | 58.62 | 34.87 |
| KRH52194 | Soybean | cytosol | 56.03 | 34.76 |
| KRH61500 | Soybean | cytosol | 56.03 | 34.39 |
| VIT_04s0008g00890.t01 | Wine grape | cytosol | 53.45 | 33.51 |
| KRH05492 | Soybean | cytosol | 54.31 | 33.51 |
| PGSC0003DMT400075340 | Potato | cytosol | 54.31 | 33.16 |
| CDY11503 | Canola | cytosol | 53.45 | 32.98 |
| CDX76731 | Canola | cytosol | 53.45 | 32.98 |
| Bra007772.1-P | Field mustard | cytosol | 53.45 | 32.98 |
| Solyc12g095970.1.1 | Tomato | cytosol | 53.45 | 32.63 |
| PGSC0003DMT400077008 | Potato | cytosol | 51.72 | 31.91 |
| AT2G26040.1 | Thale cress | cytosol | 50.86 | 31.05 |
| HORVU1Hr1G070420.1 | Barley | mitochondrion | 53.45 | 30.85 |
| KRH15519 | Soybean | cytosol | 53.45 | 29.52 |
| HORVU3Hr1G088100.1 | Barley | plastid | 51.72 | 29.13 |
| HORVU3Hr1G039010.1 | Barley | plastid | 51.72 | 29.13 |
| HORVU3Hr1G107030.1 | Barley | mitochondrion | 68.97 | 27.68 |
| CDY48030 | Canola | plastid | 48.28 | 27.32 |
| CDY22516 | Canola | plastid | 48.28 | 27.32 |
| CDX82120 | Canola | plastid | 48.28 | 27.32 |
| HORVU4Hr1G055220.1 | Barley | cytosol | 52.59 | 27.23 |
| Bra008064.1-P | Field mustard | plastid | 47.41 | 26.83 |
| AT1G73000.1 | Thale cress | cytosol, plastid | 47.41 | 26.32 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 32.76 | 23.9 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 38.79 | 22.84 |
| HORVU1Hr1G050110.1 | Barley | plastid | 52.59 | 22.26 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 14.66 | 19.77 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 43.1 | 17.18 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G030210.5 | EnsemblPlantsGene:HORVU3Hr1G030210 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF22 | PFAM:PF10604 | SUPFAM:SSF55961 | UniParc:UPI0002966D8B | UniProt:M0WDJ6 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:142649015..142649365
Molecular Weight (calculated)
12586.9 Da
IEP (calculated)
5.063
GRAVY (calculated)
0.031
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVAQRMPA SGCAAWPIVR NFGNPQRYTH FVRTSALVAG DEASIGKAWE DTVVSGLPTS TSSERLEILD DGRHILSFSI VDGEHCLCNY RSVSSVTEIL
101: LGPYRAVVES YVVPDG
101: LGPYRAVVES YVVPDG
001: MSSSPAVKGL TDEEQKTLEP VIKTYHQFEP DPTTCTSLIT QRIHAPASVV WPLIRRFDNP ERYKHFVKRC RLISGDGDVG SVREVTVISG LPASTSTERL
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE
Arabidopsis Description
PYL2Abscisic acid receptor PYL2 [Source:UniProtKB/Swiss-Prot;Acc:O80992]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.