Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 20.14 | 65.56 |
| Solyc08g062640.2.1 | Tomato | cytosol | 28.33 | 61.94 |
| Os01t0583100-01 | Rice | cytosol | 73.04 | 54.04 |
| GSMUA_Achr7P24000_001 | Banana | cytosol | 65.19 | 48.72 |
| Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 72.35 | 48.4 |
| HORVU3Hr1G067380.4 | Barley | cytosol | 54.95 | 47.77 |
| HORVU1Hr1G094840.9 | Barley | extracellular, mitochondrion | 67.92 | 47.61 |
| HORVU3Hr1G067360.1 | Barley | cytosol, peroxisome | 8.19 | 47.06 |
| HORVU3Hr1G050340.1 | Barley | plasma membrane, vacuole | 75.43 | 46.33 |
| GSMUA_Achr8P05700_001 | Banana | cytosol, peroxisome, plasma membrane | 67.24 | 45.18 |
| EES00964 | Sorghum | peroxisome, plasma membrane, vacuole | 73.04 | 44.4 |
| Zm00001d044301_P001 | Maize | cytosol, nucleus | 72.01 | 43.59 |
| HORVU1Hr1G080290.6 | Barley | cytosol | 55.63 | 42.45 |
| CDX83901 | Canola | cytosol | 48.12 | 40.29 |
| Bra016595.1-P | Field mustard | cytosol | 56.31 | 40.24 |
| CDX96761 | Canola | cytosol | 47.1 | 39.43 |
| HORVU7Hr1G008370.1 | Barley | cytosol, peroxisome | 13.99 | 39.05 |
| GSMUA_Achr3P26270_001 | Banana | cytosol, peroxisome, plastid | 64.16 | 37.9 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 56.31 | 34.74 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 56.66 | 34.3 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 56.66 | 34.3 |
| CDY26234 | Canola | cytosol | 57.68 | 34.07 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 63.48 | 33.94 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 58.7 | 33.86 |
| Bra025964.1-P | Field mustard | cytosol | 57.68 | 33.27 |
| PGSC0003DMT400006608 | Potato | plastid | 61.77 | 33.21 |
| AT1G17550.1 | Thale cress | cytosol | 57.68 | 33.07 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 62.12 | 33.03 |
| CDY48313 | Canola | cytosol | 56.31 | 32.93 |
| HORVU7Hr1G008520.2 | Barley | cytosol | 18.43 | 32.53 |
| AT1G72770.1 | Thale cress | cytosol | 56.66 | 32.49 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 59.39 | 32.46 |
| HORVU1Hr1G090360.2 | Barley | cytosol, mitochondrion, nucleus | 43.69 | 32.41 |
| HORVU3Hr1G059170.2 | Barley | cytosol, nucleus | 44.03 | 32.33 |
| KRH61549 | Soybean | cytosol | 59.39 | 31.99 |
| KRH05300 | Soybean | cytosol | 60.75 | 31.9 |
| KRH52222 | Soybean | cytosol | 59.04 | 31.8 |
| KRH15739 | Soybean | cytosol | 60.41 | 31.78 |
| HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 41.3 | 30.79 |
| HORVU7Hr1G008470.2 | Barley | cytosol | 37.88 | 29.84 |
| HORVU4Hr1G060370.1 | Barley | nucleus | 40.61 | 29.75 |
| HORVU7Hr1G008560.2 | Barley | mitochondrion | 21.16 | 25.51 |
| HORVU2Hr1G000090.2 | Barley | cytosol | 37.2 | 24.01 |
| Solyc08g062650.2.1 | Tomato | extracellular | 37.88 | 23.67 |
| HORVU7Hr1G008550.1 | Barley | cytosol | 17.41 | 22.57 |
| HORVU7Hr1G093200.5 | Barley | endoplasmic reticulum, plastid | 28.67 | 7.62 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | UniProt:A0A287VW12 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:HORVU7Hr1G029040 | EnsemblPlants:HORVU7Hr1G029040.1 |
| InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF373 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI000B46888B |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:54028669..54033782
Molecular Weight (calculated)
32334.6 Da
IEP (calculated)
7.152
GRAVY (calculated)
-0.152
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: VDGPYPMWFR LPAHFFAVYD GHSGPQVANY CRDRLHAALV EELGRTERTL SGVSWGTVEF KKQWEKAFVD VFCMVDDEVG GKVTRGLAKA AEVEPLAPDH
101: IGSTAVVAVI WFSHIIIANC GDSRAVLCRG KKPVPLTVDH IPNREDEYAR IEAAGGNIIQ WDGYRVLGVL SVTRSIGDRY LKPWIIPVPE VTVVPRQAED
201: ECLILASDGL WDVLSNQEVC DVARQRILLW HKNNSIASSS AERSGDSSDP AAQAAAEYLS KLARRKGSKD DITVIVVDLK AKRKFKSKLG TPV
101: IGSTAVVAVI WFSHIIIANC GDSRAVLCRG KKPVPLTVDH IPNREDEYAR IEAAGGNIIQ WDGYRVLGVL SVTRSIGDRY LKPWIIPVPE VTVVPRQAED
201: ECLILASDGL WDVLSNQEVC DVARQRILLW HKNNSIASSS AERSGDSSDP AAQAAAEYLS KLARRKGSKD DITVIVVDLK AKRKFKSKLG TPV
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.