Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 13.1 | 72.22 |
| GSMUA_Achr8P05700_001 | Banana | cytosol, peroxisome, plasma membrane | 60.48 | 68.81 |
| Solyc08g062640.2.1 | Tomato | cytosol | 18.15 | 67.16 |
| Os01t0583100-01 | Rice | cytosol | 51.81 | 64.9 |
| HORVU7Hr1G029040.1 | Barley | cytosol, peroxisome | 37.9 | 64.16 |
| GSMUA_Achr7P24000_001 | Banana | cytosol | 49.8 | 63.01 |
| Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 52.62 | 59.59 |
| Zm00001d039163_P002 | Maize | cytosol | 49.8 | 57.58 |
| HORVU3Hr1G050340.1 | Barley | plasma membrane, vacuole | 55.04 | 57.23 |
| Zm00001d009747_P001 | Maize | cytosol | 48.79 | 57.21 |
| Os05t0592800-02 | Rice | endoplasmic reticulum, vacuole | 51.01 | 56.85 |
| TraesCS1D01G449700.1 | Wheat | cytosol | 46.77 | 56.59 |
| TraesCS1A01G441200.1 | Wheat | cytosol | 46.98 | 56.55 |
| KXG22681 | Sorghum | cytosol | 48.79 | 56.54 |
| TraesCS3D01G212100.1 | Wheat | peroxisome, plasma membrane, vacuole | 54.23 | 56.51 |
| TraesCS3B01G240000.1 | Wheat | peroxisome, plasma membrane, vacuole | 54.44 | 56.37 |
| EES00964 | Sorghum | peroxisome, plasma membrane, vacuole | 54.64 | 56.22 |
| HORVU1Hr1G094840.9 | Barley | extracellular, mitochondrion | 47.38 | 56.22 |
| TraesCS3A01G209200.1 | Wheat | peroxisome, plasma membrane, vacuole | 54.03 | 55.95 |
| Zm00001d044301_P001 | Maize | cytosol, nucleus | 54.44 | 55.79 |
| CDX96761 | Canola | cytosol | 37.7 | 53.43 |
| CDX83901 | Canola | cytosol | 37.7 | 53.43 |
| TraesCS1B01G475700.1 | Wheat | cytosol | 46.98 | 52.36 |
| GSMUA_Achr3P32040_001 | Banana | cytosol, peroxisome, plastid | 20.97 | 51.49 |
| Bra016595.1-P | Field mustard | cytosol | 42.14 | 50.98 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 52.22 | 47.01 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.41 | 46.29 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 49.8 | 46.08 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 47.18 | 46.06 |
| GSMUA_Achr2P09370_001 | Banana | cytosol | 30.04 | 45.99 |
| GSMUA_Achr2P19990_001 | Banana | cytosol | 21.77 | 45.76 |
| GSMUA_Achr11P... | Banana | cytosol | 23.19 | 45.45 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 43.35 | 45.26 |
| GSMUA_Achr8P14370_001 | Banana | cytosol | 26.81 | 45.24 |
| KRH61549 | Soybean | cytosol | 49.19 | 44.85 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 43.75 | 44.83 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 43.75 | 44.83 |
| CDY26234 | Canola | cytosol | 44.56 | 44.56 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 49.19 | 44.53 |
| KRH52222 | Soybean | cytosol | 48.79 | 44.49 |
| KRH05300 | Soybean | cytosol | 49.8 | 44.27 |
| KRH15739 | Soybean | cytosol | 49.6 | 44.17 |
| PGSC0003DMT400006608 | Potato | plastid | 48.19 | 43.85 |
| AT1G17550.1 | Thale cress | cytosol | 45.16 | 43.84 |
| Bra025964.1-P | Field mustard | cytosol | 44.76 | 43.7 |
| AT1G72770.1 | Thale cress | cytosol | 44.76 | 43.44 |
| CDY48313 | Canola | cytosol | 43.75 | 43.31 |
| GSMUA_Achr8P04220_001 | Banana | cytosol, nucleus, peroxisome | 27.02 | 39.65 |
| GSMUA_Achr11P... | Banana | cytosol | 30.85 | 38.73 |
| GSMUA_Achr6P15180_001 | Banana | cytosol | 28.43 | 38.11 |
| GSMUA_Achr5P29000_001 | Banana | cytosol | 29.03 | 37.7 |
| GSMUA_Achr10P... | Banana | plastid | 26.81 | 35.95 |
| GSMUA_Achr11P... | Banana | cytosol | 28.63 | 35.06 |
| Solyc08g062650.2.1 | Tomato | extracellular | 31.85 | 33.69 |
| GSMUA_Achr2P19980_001 | Banana | vacuole | 3.23 | 29.63 |
| GSMUA_Achr2P08890_001 | Banana | mitochondrion | 20.16 | 9.27 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 |
| GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr3G26270_001 | EnsemblPlants:GSMUA_Achr3P26270_001 | EnsemblPlants:GSMUA_Achr3T26270_001 | InterPro:IPR001932 | InterPro:IPR036457 |
| UniProt:M0SHZ3 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF373 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI0002958C65 | SEG:seg | : | : | : | : |
Description
Probable protein phosphatase 2C 6 [Source:GMGC_GENE;Acc:GSMUA_Achr3G26270_001]
Coordinates
chr3:-:26178209..26181524
Molecular Weight (calculated)
53273.4 Da
IEP (calculated)
4.579
GRAVY (calculated)
-0.132
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEMPPALSL PSGVGSSLCD AAVEIAHRKR TAEEAEHLLS GPMAASGSDS VGVVEQIEAA APTAALEEDG GGDDPITESD MEDSTSVEPG LSVESSCSVV
101: SDSSSISCAM HEFSVSDSSC EMGTPSSVDA GNSLVEIVPV SASVELLAVS MSMFLMESMP LWGCITICGR RPEMEDAVVV VPNFFEVPLR LLTGDQIVDD
201: LDPDVIRLPL HFFGVYDGHG GAQVANYCRE HLHLVLIDQL RSLVKDSGGT SCSNWKRKWE KVFVACFQKI DDEVGGKGSR GNMGSTAEAP NEGNLPCPNV
301: PLEPVAPDTV GSTAVVAVIS SSHIIIANCG DSRAVLCRGK QPMPLSVDHK PNREDEYTRI EAQGGKVIQW NGYRVFGVLA MSRSIGDRYL KPWIIPEPEI
401: TFVQRAREDE CLIVASDGLW DVMSNEEVCD VARRRILLWH KKNGPVPPST PRGKQADPAA QAAADCLSKL ALKKGSKDNI TIIVVDLKAQ RKFKNK
101: SDSSSISCAM HEFSVSDSSC EMGTPSSVDA GNSLVEIVPV SASVELLAVS MSMFLMESMP LWGCITICGR RPEMEDAVVV VPNFFEVPLR LLTGDQIVDD
201: LDPDVIRLPL HFFGVYDGHG GAQVANYCRE HLHLVLIDQL RSLVKDSGGT SCSNWKRKWE KVFVACFQKI DDEVGGKGSR GNMGSTAEAP NEGNLPCPNV
301: PLEPVAPDTV GSTAVVAVIS SSHIIIANCG DSRAVLCRGK QPMPLSVDHK PNREDEYTRI EAQGGKVIQW NGYRVFGVLA MSRSIGDRYL KPWIIPEPEI
401: TFVQRAREDE CLIVASDGLW DVMSNEEVCD VARRRILLWH KKNGPVPPST PRGKQADPAA QAAADCLSKL ALKKGSKDNI TIIVVDLKAQ RKFKNK
001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
Arabidopsis Description
HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.