Factsheet for GSMUA_Achr2P09370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g03180.t01	Wine grape	nucleus	60.49	49.49
KRH60215	Soybean	cytoskeleton, cytosol, nucleus	56.79	47.92
KRH41498	Soybean	nucleus	56.79	47.79
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	29.32	47.03
GSMUA_Achr2P19990_001	Banana	cytosol	32.1	44.07
GSMUA_Achr11P...	Banana	cytosol	32.72	41.9
GSMUA_AchrUn_...	Banana	cytosol	36.42	41.7
VIT_09s0002g03530.t01	Wine grape	nucleus	47.22	41.13
VIT_09s0002g03600.t01	Wine grape	nucleus	45.06	40.44
GSMUA_Achr8P14370_001	Banana	cytosol	33.95	37.41
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	38.58	36.98
GSMUA_Achr7P24000_001	Banana	cytosol	44.14	36.48
GSMUA_Achr5P29000_001	Banana	cytosol	41.67	35.34
GSMUA_Achr11P...	Banana	cytosol	42.9	35.19
GSMUA_Achr6P15180_001	Banana	cytosol	39.81	34.86
GSMUA_Achr10P...	Banana	plastid	39.2	34.32
GSMUA_Achr8P05700_001	Banana	cytosol, peroxisome, plasma membrane	45.68	33.95
GSMUA_Achr3P26270_001	Banana	cytosol, peroxisome, plastid	45.99	30.04
GSMUA_Achr11P...	Banana	cytosol	34.88	27.9
GSMUA_Achr2P19980_001	Banana	vacuole	4.63	27.78
GSMUA_Achr2P08890_001	Banana	mitochondrion	25.31	7.6

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr2G09370_001	EnsemblPlants:GSMUA_Achr2P09370_001	EnsemblPlants:GSMUA_Achr2T09370_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0S6H8
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF357	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0002960051	SEG:seg	:	:	:	:

Description

Probable protein phosphatase 2C 6 [Source:GMGC_GENE;Acc:GSMUA_Achr2G09370_001]

Coordinates

chr2:-:13001897..13007233

Molecular Weight (calculated)

35877.4 Da

IEP (calculated)

6.180

GRAVY (calculated)

-0.381

Length

324 amino acids

Sequence
(BLAST)

001: MESDPPGIQP RRARDEDPAT AASSSAEIPA PTGLVAQPAE ARGRCLWRKG GAAAVSWGAA STVGRRKEME DAVAVSHVRF FGVYDGHGGA QVADYCAKRV
101: HEVVAEEWDR IQNPECWKRR WETAFHDGFK RVDNEVIDEA VAPDIIGSTA VVVVISGCQI ISSNCGDSRA LLCRGNQRIQ LTIDHKPDRE DELMRIESLG
201: GRVINWQGCR ISGVLAVSRS IGDRYMRPWV IPVPEISFMS RSEDDDCLIL ASDGLWDVMS IEEVGDMACR HFRWQRRNGL VDGVSPAQAV ADHLTELAYQ
301: KNSSDNISVV VVDLKSRSRR RPRQ

Best Arabidopsis Sequence Match ( AT1G72770.3 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.