Factsheet for VIT_09s0002g03600.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g03530.t01	Wine grape	nucleus	98.61	95.7
VIT_11s0016g03180.t01	Wine grape	nucleus	50.69	46.21
GSMUA_Achr2P09370_001	Banana	cytosol	40.44	45.06
VIT_06s0004g05460.t01	Wine grape	nucleus	34.9	32.06
VIT_13s0019g02200.t01	Wine grape	plastid	34.63	31.25
VIT_16s0022g02210.t01	Wine grape	nucleus	31.86	30.75
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	27.15	29.61
VIT_16s0050g02680.t01	Wine grape	nucleus	23.82	29.15
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	29.92	27.48
VIT_11s0016g01780.t01	Wine grape	plastid	34.9	24.09
VIT_04s0008g01420.t01	Wine grape	cytosol	34.9	22.87
VIT_09s0002g01850.t01	Wine grape	cytosol, peroxisome, plastid	34.63	22.81
VIT_00s0179g00110.t01	Wine grape	vacuole	21.88	21.64
VIT_00s0179g00140.t01	Wine grape	vacuole	22.71	17.3

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	ProteinID:CCB59429	ProteinID:CCB59429.1
UniProt:F6HYA6	EMBL:FN596494	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF357	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000210A214
ArrayExpress:VIT_09s0002g03600	EnsemblPlantsGene:VIT_09s0002g03600	EnsemblPlants:VIT_09s0002g03600.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:-:3262202..3276089

Molecular Weight (calculated)

39214.2 Da

IEP (calculated)

6.180

GRAVY (calculated)

-0.334

Length

361 amino acids

Sequence
(BLAST)

001: MAHPFEAHHI LNLCAPCDSI RPPNVSGKRP ASSFSQNGNS NSRNGEAPIP VCPNSSLAAG GSGVPTCVGK DNKKVSWGRS SDVGKRSGME DSLAIVPGFM
101: SLSCKQVGGC TAPECTYAAE DSPVHFFGLY DGHGGPQVSC YCARMLHEMV AEEWERGGGD EWSKWWEVAL RRAYGRADDA LKDRALAPYS VGSTSLVVVV
201: SPCQIIAANC GDSRAVLCRG TQAIPLTVDH KLDRQDELAR IEEAGGQILY WQGPRVEGVL SMTRAIEPEV TFTTRSDEDE CLILASDGLW DVLSNEQVVK
301: VARNSLREER RKALLNDSSL PPAHSAADSL LCCALAEYSD DNISIIVVDL KSRKRRHQYR H

Best Arabidopsis Sequence Match ( AT1G72770.1 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.