Factsheet for VIT_02s0025g01390.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	31.3	60.89
PGSC0003DMT400094534	Potato	cytosol	29.77	58.5
GSMUA_Achr2P19990_001	Banana	cytosol	32.06	53.39
KRH77641	Soybean	plastid	43.77	53.09
KRH27848	Soybean	nucleus	43.26	50.6
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	41.48	49.24
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	40.97	47.63
Os05t0572700-02	Rice	cytosol	45.04	46.46
TraesCS3A01G237800.1	Wheat	plastid	46.56	46.45
HORVU3Hr1G059170.2	Barley	cytosol, nucleus	46.56	45.86
VIT_16s0050g02680.t01	Wine grape	nucleus	34.35	45.76
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	46.56	45.75
TraesCS1D01G419000.1	Wheat	nucleus	43.77	45.62
TraesCS1B01G441400.1	Wheat	cytosol	44.27	45.31
TraesCS1A01G411200.1	Wheat	nucleus	44.02	45.29
Zm00001d009626_P001	Maize	nucleus	43.0	45.07
Os01t0656200-01	Rice	cytosol, nucleus, plastid	46.06	44.91
HORVU1Hr1G090360.2	Barley	cytosol, mitochondrion, nucleus	44.78	44.56
OQU78453	Sorghum	nucleus	44.27	44.05
Zm00001d011495_P001	Maize	cytosol	43.26	43.15
GSMUA_Achr10P...	Banana	plastid	40.46	42.97
TraesCS3B01G266200.1	Wheat	nucleus, peroxisome, plastid	45.04	42.75
GSMUA_Achr2P19980_001	Banana	vacuole	5.85	42.59
Zm00001d044015_P001	Maize	cytosol	44.27	42.44
Solyc08g082260.1.1	Tomato	nucleus	39.95	39.95
VIT_06s0004g05460.t01	Wine grape	nucleus	37.15	37.15
VIT_13s0019g02200.t01	Wine grape	plastid	36.9	36.25
KXG33023	Sorghum	nucleus	43.26	35.87
VIT_16s0022g02210.t01	Wine grape	nucleus	31.55	33.16
VIT_11s0016g03180.t01	Wine grape	nucleus	31.55	31.31
VIT_09s0002g03530.t01	Wine grape	nucleus	28.5	30.11
VIT_09s0002g03600.t01	Wine grape	nucleus	27.48	29.92
VIT_11s0016g01780.t01	Wine grape	plastid	35.37	26.58
VIT_04s0008g01420.t01	Wine grape	cytosol	36.13	25.77
VIT_09s0002g01850.t01	Wine grape	cytosol, peroxisome, plastid	35.37	25.36
VIT_00s0179g00110.t01	Wine grape	vacuole	21.12	22.74
VIT_00s0179g00140.t01	Wine grape	vacuole	21.63	17.93

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100251367	wikigene:100251367	MapMan:18.4.24.2.1	Gene3D:3.60.40.10
ProteinID:CBI34477	ProteinID:CBI34477.3	UniProt:D7TVF2	EMBL:FN596251	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100251367	wikigene:LOC100251367	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF527	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0001982C2C	ArrayExpress:VIT_02s0025g01390
EnsemblPlantsGene:VIT_02s0025g01390	EnsemblPlants:VIT_02s0025g01390.t01	unigene:Vvi.22135	RefSeq:XP_002266149	RefSeq:XP_002266149.1	SEG:seg

Description

No Description!

Coordinates

chr2:-:1336359..1338224

Molecular Weight (calculated)

42731.4 Da

IEP (calculated)

5.413

GRAVY (calculated)

-0.427

Length

393 amino acids

Sequence
(BLAST)

001: MDSVETIKPR VDPQLGADAY VKKRRTGIKE EASFRSSKGV EEESKMDDGA VKLNSELSTS GSSAPESSAS QSGGASDGEV VSESEEQGGK EGEKRVSTCV
101: PHGSMSVIGR RRAMEDALTV APGEFDSYDF YAVYDGHGGA KVAYACRDRL HRLLAKEIED AINGEGRIDW ENVMVASFSK MDEEINGEAN QVEDRSTSSL
201: LRSMGSTAVV VVVGPEKLVV ANCGDSRAVL CRRGVAVPLS RDHKPDRPDE RERVEAAGGK VINWNGFRIL GVLSTSRSIG DYFLKPYVTP KPEVTVWERE
301: EFDDFIVIAS DGLWDVITNE LACKIVRKCF DGQIRRRVSE GMSRSCAAKA AAMLTELAMA QGSKDNISVV VVELKKHLCY GGLKLKNPNS PSH

Best Arabidopsis Sequence Match ( AT3G11410.1 )
(BLAST)

001: MAGICCGVVG ETEPAAPVDS TSRASLRRRL DLLPSIKIVA DSAVAPPLEN CRKRQKRETV VLSTLPGNLD LDSNVRSENK KARSAVTNSN SVTEAESFFS
101: DVPKIGTTSV CGRRRDMEDA VSIHPSFLQR NSENHHFYGV FDGHGCSHVA EKCRERLHDI VKKEVEVMAS DEWTETMVKS FQKMDKEVSQ RECNLVVNGA
201: TRSMKNSCRC ELQSPQCDAV GSTAVVSVVT PEKIIVSNCG DSRAVLCRNG VAIPLSVDHK PDRPDELIRI QQAGGRVIYW DGARVLGVLA MSRAIGDNYL
301: KPYVIPDPEV TVTDRTDEDE CLILASDGLW DVVPNETACG VARMCLRGAG AGDDSDAAHN ACSDAALLLT KLALARQSSD NVSVVVVDLR KRRNNQASS

Arabidopsis Description

PP2CAProtein phosphatase 2C 37 [Source:UniProtKB/Swiss-Prot;Acc:P49598]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.