Factsheet for TraesCS3B01G266200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	90.58	93.75
HORVU3Hr1G059170.2	Barley	cytosol, nucleus	90.1	93.48
TraesCS3A01G237800.1	Wheat	plastid	88.89	93.4
Os01t0656200-01	Rice	cytosol, nucleus, plastid	79.47	81.64
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	36.72	75.25
TraesCS1B01G441400.1	Wheat	cytosol	58.94	63.54
Zm00001d044015_P001	Maize	cytosol	62.8	63.41
Zm00001d011495_P001	Maize	cytosol	59.18	62.18
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	47.58	58.28
PGSC0003DMT400094534	Potato	cytosol	27.78	57.5
KXG33023	Sorghum	nucleus	60.39	52.74
KRH77641	Soybean	plastid	40.82	52.16
KRH27848	Soybean	nucleus	40.58	50.0
TraesCS5B01G182000.1	Wheat	peroxisome	40.82	48.42
Solyc03g007230.2.1	Tomato	cytosol	44.44	46.35
VIT_16s0050g02680.t01	Wine grape	nucleus	32.61	45.76
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	42.75	45.04
PGSC0003DMT400023517	Potato	nucleus	43.24	44.86
KRH16556	Soybean	plastid	41.55	44.56
KRG94219	Soybean	plastid	40.34	44.3
TraesCS4B01G210100.1	Wheat	nucleus	42.51	43.35
PGSC0003DMT400050448	Potato	cytosol	40.1	41.71
Solyc08g082260.1.1	Tomato	nucleus	38.41	40.46
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	31.88	39.88
TraesCS3B01G394600.3	Wheat	plastid	41.06	39.72
Solyc06g051940.2.1	Tomato	cytosol	42.03	39.37
TraesCS1B01G375100.1	Wheat	cytosol	34.3	37.27
TraesCS1B01G475700.1	Wheat	cytosol	37.44	34.83
TraesCS2B01G023600.1	Wheat	cytosol	37.68	33.91
TraesCS3B01G277900.1	Wheat	cytosol	33.09	32.85
TraesCS3B01G240000.1	Wheat	peroxisome, plasma membrane, vacuole	37.92	32.78
TraesCS3B01G171100.1	Wheat	peroxisome	26.09	30.77
TraesCS3B01G170900.1	Wheat	peroxisome	21.74	28.66
TraesCS3B01G171000.1	Wheat	cytosol, nucleus, peroxisome	21.98	28.35
TraesCS7B01G297000.2	Wheat	plasma membrane	22.71	8.81

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
EnsemblPlantsGene:TraesCS3B01G266200	EnsemblPlants:TraesCS3B01G266200.1	TIGR:cd00143	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:+:426994793..427001946

Molecular Weight (calculated)

44204.3 Da

IEP (calculated)

6.670

GRAVY (calculated)

-0.217

Length

414 amino acids

Sequence
(BLAST)

001: MSSETSKRDH ALELLAADRK LMTVARSARR RRLELRRLGR TASAAAEDEG AKRVRPALDN SSDSSDSAKV APKPPLVASR CSACVSHGAV SVIGRRREME
101: DAVAVAAPFL AETAAVEGSG DVEYGAGEEG FFAVYDGHGG SRVAEACRLR MHLVLAEEVR LRRLQPWGGG QGRTEDGEDG ARWKEAMTAC FARVDGEVGV
201: DDGTDAGEQT VGSTALVAVV GLRRIVVANC GDSRAVLSRG GIPVPLSSDH KWCVGTLTSF SCFDGTQPDR PDEMERVEAA GGKVINWNGY RILGVLATSR
301: SIGDYYLKPY VIAEPEVTVM DRTDKDEFLI LASDGLWDVV SNDVACKIAR NCLSGRAASK YPESVPGSTA ADAAALLVEL AIARGSKDNI SVVVVELRRL
401: KSRAAAVIKE NRTR

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.