Factsheet for Solyc08g082260.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400094534	Potato	cytosol	45.8	90.0
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	30.03	58.42
KRH77641	Soybean	plastid	41.73	50.62
GSMUA_Achr2P19990_001	Banana	cytosol	30.28	50.42
KRH27848	Soybean	nucleus	40.71	47.62
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	38.93	45.27
GSMUA_Achr2P19980_001	Banana	vacuole	5.85	42.59
Zm00001d009626_P001	Maize	nucleus	40.2	42.13
Os05t0572700-02	Rice	cytosol	40.2	41.47
TraesCS1D01G419000.1	Wheat	nucleus	39.19	40.85
OQU78453	Sorghum	nucleus	40.97	40.76
TraesCS1A01G411200.1	Wheat	nucleus	39.44	40.58
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	41.22	40.5
HORVU3Hr1G059170.2	Barley	cytosol, nucleus	40.71	40.1
Os01t0656200-01	Rice	cytosol, nucleus, plastid	40.97	39.95
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	39.95	39.95
TraesCS1B01G441400.1	Wheat	cytosol	38.93	39.84
TraesCS3A01G237800.1	Wheat	plastid	39.69	39.59
HORVU1Hr1G090360.2	Barley	cytosol, mitochondrion, nucleus	39.44	39.24
Solyc03g007230.2.1	Tomato	cytosol	39.19	38.79
TraesCS3B01G266200.1	Wheat	nucleus, peroxisome, plastid	40.46	38.41
Zm00001d011495_P001	Maize	cytosol	38.42	38.32
GSMUA_Achr10P...	Banana	plastid	35.62	37.84
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	31.81	37.76
Zm00001d044015_P001	Maize	cytosol	38.68	37.07
Solyc03g006950.1.1	Tomato	cytosol, nucleus, peroxisome	32.06	36.31
Solyc06g051940.2.1	Tomato	cytosol	40.71	36.2
Solyc03g006940.1.1	Tomato	nucleus	31.55	35.94
Solyc03g006960.2.1	Tomato	nucleus	33.08	34.57
Solyc08g062640.2.1	Tomato	cytosol	11.7	34.33
Solyc05g052980.2.1	Tomato	nucleus	34.61	33.25
Solyc06g076400.2.1	Tomato	nucleus	33.33	31.95
Solyc03g006930.1.1	Tomato	cytosol	26.72	31.72
KXG33023	Sorghum	nucleus	37.91	31.43
Solyc03g096670.2.1	Tomato	nucleus	32.32	31.28
Solyc06g082700.1.1	Tomato	cytosol, peroxisome, plastid	11.2	30.99
Solyc06g084100.2.1	Tomato	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	19.08	28.2
Solyc12g096020.1.1	Tomato	cytosol, nucleus, plastid	33.59	25.98
Solyc07g040990.2.1	Tomato	cytosol	31.55	23.13
Solyc08g062650.2.1	Tomato	extracellular	26.21	21.96
Solyc09g065650.2.1	Tomato	mitochondrion	17.56	7.39

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4CPM2	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc08g082260.1	EnsemblPlants:Solyc08g082260.1.1	UniParc:UPI000276C6AA	SEG:seg

Description

No Description!

Coordinates

chr8:-:65099564..65101353

Molecular Weight (calculated)

44176.4 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.550

Length

393 amino acids

Sequence
(BLAST)

001: MVSDPGNNKP RDVFHKRILK SYHKRQQLQQ RIMTSTNSSD ENDAISAYRD QDKDYNPKKR FCLRENEPID KSSSNSTTTN YTIELRSMGS SSTVVEIPGD
101: NIELKYGCIS MIGRRRVMED AIKASIKMAN NEFIFFGAYD GHGGSRVSHA CRDRLDYVLE EELLNAKRKL MNNDDDGSDN SNYVDWEKVM VKCFSKIDNE
201: VMREGNWIAG YEEGRYEDVK KTVGSTAVVV MVGKEEIVVA NCGDCRAILC SRGVAIPLSN DHKPDRPDEK KRVEAAGGKI LNWNGSRVQG ILATSRSIGD
301: HCLKPFVIPE PEVTVYKRNE LDEFIVIATD GLWDVVSNEV TCDVARKCLR QIRRKFPERD SAADAAALLA ELAIARGSKD NISVIVVELD KMS

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.