Factsheet for TraesCS3D01G238000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G237800.1	Wheat	plastid	92.75	94.16
HORVU3Hr1G059170.2	Barley	cytosol, nucleus	92.5	92.73
TraesCS3B01G266200.1	Wheat	nucleus, peroxisome, plastid	93.75	90.58
Os01t0656200-01	Rice	cytosol, nucleus, plastid	83.0	82.38
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	38.5	76.24
Zm00001d044015_P001	Maize	cytosol	64.75	63.17
TraesCS1D01G419000.1	Wheat	nucleus	59.25	62.86
Zm00001d011495_P001	Maize	cytosol	61.25	62.18
PGSC0003DMT400094534	Potato	cytosol	29.5	59.0
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	48.25	57.1
KXG33023	Sorghum	nucleus	63.0	53.16
KRH77641	Soybean	plastid	42.25	52.16
KRH27848	Soybean	nucleus	42.25	50.3
TraesCS5D01G188600.1	Wheat	peroxisome	42.0	48.14
Solyc03g007230.2.1	Tomato	cytosol	47.5	47.86
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	45.75	46.56
VIT_16s0050g02680.t01	Wine grape	nucleus	34.25	46.44
PGSC0003DMT400023517	Potato	nucleus	46.25	46.37
KRG94219	Soybean	plastid	42.25	44.83
KRH16556	Soybean	plastid	43.0	44.56
TraesCS3D01G355900.1	Wheat	plastid	43.5	43.83
TraesCS4D01G210900.1	Wheat	nucleus	43.75	42.68
PGSC0003DMT400050448	Potato	cytosol	42.0	42.21
Solyc08g082260.1.1	Tomato	nucleus	40.5	41.22
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	34.0	41.09
Solyc06g051940.2.1	Tomato	cytosol	44.25	40.05
TraesCS1D01G449700.1	Wheat	cytosol	39.5	38.54
TraesCS7D01G042600.1	Wheat	cytosol	32.5	37.9
TraesCS1D01G363500.1	Wheat	cytosol	35.5	37.17
TraesCS3D01G249000.1	Wheat	cytosol	34.5	36.41
TraesCS7D01G042300.1	Wheat	cytosol	32.25	34.86
TraesCS2D01G000300.1	Wheat	cytosol	39.25	34.58
TraesCS3D01G212100.1	Wheat	peroxisome, plasma membrane, vacuole	39.0	32.77
TraesCS3D01G153200.1	Wheat	nucleus, peroxisome, plastid	27.25	31.05
TraesCS3D01G153000.1	Wheat	peroxisome	21.75	28.43
TraesCS7D01G390600.1	Wheat	plasma membrane	23.5	8.81

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
EnsemblPlantsGene:TraesCS3D01G238000	EnsemblPlants:TraesCS3D01G238000.1	TIGR:cd00143	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:+:329494722..329498933

Molecular Weight (calculated)

42710.4 Da

IEP (calculated)

6.286

GRAVY (calculated)

-0.277

Length

400 amino acids

Sequence
(BLAST)

001: MSSETSKRDH ARELLAADKK LMTVARSARR RRLEIRRLGR TASAAAEDEG AKRVRPAPDS SSESSDSAKV APEPPVVASR CSACVSHGAV SVIGRRREME
101: DAVAVAAPFL AETAVVEGSG EVEYGAGDEG FFAVYDGHGG SRVAEACRLR MHLVLAEEVR LRRLQPGGGG QGQDEDDENV TRWKEAMTAC FARVDGEVGV
201: DDGTDAGEQT VGSTAVVAVV GPRRIVVANC GDSRAVLSRG GVPVPLSADH KPDRPDEMER VEAAGGKVIN WNGYRILGVL ATSRSIGDYY LKPYVIAEPE
301: VTVMDRTDKD EFLILASDGL WDVVSNDVAC KIARNCLSGR AASKYPESVS GSTAADAAAL LVELAIARGS KDNISVVVVE LRRLKSRAAA VIKENRTRWH

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.