Factsheet for TraesCS3D01G153000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G144400.1	Wheat	peroxisome	91.5	91.5
TraesCS3B01G170900.1	Wheat	peroxisome	88.24	85.99
TraesCS3D01G153200.1	Wheat	nucleus, peroxisome, plastid	45.42	39.6
TraesCS1D01G419000.1	Wheat	nucleus	30.07	24.4
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	28.43	21.75
TraesCS3D01G249000.1	Wheat	cytosol	26.8	21.64
TraesCS5D01G188600.1	Wheat	peroxisome	24.51	21.49
TraesCS1D01G363500.1	Wheat	cytosol	26.8	21.47
TraesCS4D01G210900.1	Wheat	nucleus	28.1	20.98
TraesCS3D01G355900.1	Wheat	plastid	27.12	20.91
TraesCS7D01G042600.1	Wheat	cytosol	22.22	19.83
TraesCS7D01G042300.1	Wheat	cytosol	23.2	19.19
TraesCS1D01G449700.1	Wheat	cytosol	25.49	19.02
OQU86100	Sorghum	nucleus	23.86	18.3
Os04t0167900-00	Rice	cytosol	12.75	18.22
TraesCS3D01G212100.1	Wheat	peroxisome, plasma membrane, vacuole	27.78	17.86
TraesCS2D01G000300.1	Wheat	cytosol	25.82	17.4
TraesCS7D01G390600.1	Wheat	plasma membrane	17.65	5.06
Zm00001d007532_P001	Maize	cytosol	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF373	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS3D01G153000	EnsemblPlants:TraesCS3D01G153000.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr3D:-:119408320..119411189

Molecular Weight (calculated)

33695.0 Da

IEP (calculated)

8.803

GRAVY (calculated)

-0.081

Length

306 amino acids

Sequence
(BLAST)

001: MDMDLNDVPE QAVPMWGECP QMYLSYGTAT RNDRLPMLKD AVAAVKSFTV LSPPMGLDFF GVFDGILGAM FSKHMEERLH VAVAEEIMRD LLAKAPRAQN
101: DVEGWWKTLI VDAFRQVDKE VLIGGGSGID APARVGSGAL VVLVLEDYFV HANRGASRAV IYRGYEAVPL TPEHTPTPQN GGGDVASRLE QIMRRHAFRS
201: SKFRATVAVP EPKVVAVKRK PGDKFLILAI PGLWDVVTPG DTCAFIERRL SVPQTIRQWD KKPTNNSGPP CVKALANELA AHAISKGTKR NVNIILILLK
301: NFWDLP

Best Arabidopsis Sequence Match ( AT1G72770.1 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.